RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 GJA10Q969M2 543 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 SLC35C1Q96A29 364 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 COA1Q9GZY4 146 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 POTEFA5A3E0 1075 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 KRIT1O00522 736 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 MEIS2O14770 477 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 EIF3DO15371 548 aaKnown RBP eCLIP16.33■□□□□ 0.21
SNF8-203ENST00000504000 POTEIP0CG38 1075 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 GAP43P17677 238 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 CIITAP33076 1130 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 MMP14P50281 582 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 DNA2P51530 1060 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 EIF6P56537 245 aaKnown RBP16.33■□□□□ 0.21
SNF8-203ENST00000504000 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 POTEGQ6S5H5 508 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 NT5DC3Q86UY8 548 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 SLC30A5Q8TAD4 765 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 BORCS6Q96GS4 357 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 MKNK1Q9BUB5 465 aa16.33■□□□□ 0.21
SNF8-203ENST00000504000 POLR3CQ9BUI4 534 aaPredicted RBP16.33■□□□□ 0.21
SNF8-203ENST00000504000 USP17L15C9J2P7 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L13C9JLJ4 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L11C9JVI0 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L18D6R9N7 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L22D6RA61 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L17D6RBQ6 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L19D6RCP7 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L20D6RJB6 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 NR3C1P04150 777 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 HNRNPH1P31943 449 aaKnown RBP16.33■□□□□ 0.2
SNF8-203ENST00000504000 CTNNA1P35221 906 aaKnown RBP16.33■□□□□ 0.2
SNF8-203ENST00000504000 SLC16A2P36021 539 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 STAT1P42224 750 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.2
SNF8-203ENST00000504000 ARHGAP4P98171 946 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 POU5F1Q01860 360 aaKnown RBP16.33■□□□□ 0.2
SNF8-203ENST00000504000 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
SNF8-203ENST00000504000 DDR1Q08345 913 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 ZNF844Q08AG5 666 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L24Q0WX57 530 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 PICALMQ13492 652 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 SFR1Q86XK3 245 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 DDX4Q9NQI0 724 aaKnown RBP16.33■□□□□ 0.2
SNF8-203ENST00000504000 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 NCANO14594 1321 aa16.33■□□□□ 0.2
SNF8-203ENST00000504000 LRRC37AA6NMS7 1700 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
SNF8-203ENST00000504000 LMNB1P20700 586 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 SREBF1P36956 1147 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
SNF8-203ENST00000504000 HHIPL2Q6UWX4 724 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 KCTD1Q719H9 257 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 LENG9Q96B70 501 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 ASTN1O14525 1302 aa16.32■□□□□ 0.2
SNF8-203ENST00000504000 GMNCA6NCL1 334 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNF8-203ENST00000504000 TRAPPC3O43617 180 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 TMEM253P0C7T8 217 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 TMC3Q7Z5M5 1100 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 CLEC10AQ8IUN9 316 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 CARD9Q9H257 536 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 ZHX3Q9H4I2 956 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 A1CFQ9NQ94 594 aaKnown RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 AMFRQ9UKV5 643 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 C5orf60A6NFR6 353 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 MYO1FO00160 1098 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 PPP1R12BO60237 982 aaPredicted RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 EYA4O95677 639 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 STAT3P40763 770 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 GTF2IP78347 998 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 TAX1BP1Q86VP1 789 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 P3H4Q92791 437 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 CABS1Q96KC9 395 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 STK33Q9BYT3 514 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 RAB17Q9H0T7 212 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 ACTR5Q9H9F9 607 aaPredicted RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 UTP11Q9Y3A2 253 aaKnown RBP16.31■□□□□ 0.2
SNF8-203ENST00000504000 CAPN7Q9Y6W3 813 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 UBE4BO95155 1302 aa16.31■□□□□ 0.2
SNF8-203ENST00000504000 TMCO5BA8MYB1 307 aa16.3■□□□□ 0.2
SNF8-203ENST00000504000 CYP3A4P08684 503 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms