RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.54
CLK1-214ENST00000496205 DSEQ9UL01 958 aa5.4□□□□□ -1.54
CLK1-214ENST00000496205 MRPS23Q9Y3D9 190 aaKnown RBP5.4□□□□□ -1.54
CLK1-214ENST00000496205 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 BLACEA4D250 179 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 IQCA1LA6NCM1 817 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 CUTAO60888 179 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
CLK1-214ENST00000496205 GNAT1P11488 350 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 GRK2P25098 689 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 GRK3P35626 688 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 SPIRE1Q08AE8 756 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 LONRF2Q1L5Z9 754 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 ZMAT1Q5H9K5 638 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 KCTD1Q719H9 257 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 LARP4Q71RC2 724 aaKnown RBP eCLIP5.39□□□□□ -1.55
CLK1-214ENST00000496205 ZG16BQ96DA0 208 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 FEZ1Q99689 392 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 FAM126AQ9BYI3 521 aaPredicted RBP5.39□□□□□ -1.55
CLK1-214ENST00000496205 TLR9Q9NR96 1032 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 IFT57Q9NWB7 429 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 HECAQ9UBI9 543 aaPredicted RBP5.39□□□□□ -1.55
CLK1-214ENST00000496205 DMRT1Q9Y5R6 373 aa5.39□□□□□ -1.55
CLK1-214ENST00000496205 TRBV23-1A0A0A0MS06 115 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 PRODHO43272 600 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 RAPGEF3O95398 923 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 ADH4P08319 380 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 PABPC1P11940 636 aaKnown RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 KRT4P19013 534 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 HIBADHP31937 336 aaKnown RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 MSX2P35548 267 aaPredicted RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 DBPQ10586 325 aaPredicted RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 NFYCQ13952 458 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 HSP90AA2PQ14568 343 aaPredicted RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 NTRK3Q16288 839 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 RSPO2Q6UXX9 243 aaPredicted RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 Q6ZPA2 131 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 MRGPRGQ86SM5 289 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 SH3RF2Q8TEC5 729 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 ZNF483Q8TF39 744 aaPredicted RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 CD244Q9BZW8 370 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 KIAA1683Q9H0B3 1180 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 ZNF703Q9H7S9 590 aaPredicted RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 NCOA5Q9HCD5 579 aaKnown RBP5.38□□□□□ -1.55
CLK1-214ENST00000496205 CEP72Q9P209 647 aa5.38□□□□□ -1.55
CLK1-214ENST00000496205 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.37□□□□□ -1.55
CLK1-214ENST00000496205 TCRBV5S4A2TA0A5A2 114 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 FAM83GA6ND36 823 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 AGRPO00253 132 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 ARHGAP6O43182 974 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 FGFR1P11362 822 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 PDE6AP16499 860 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 ETV4P43268 484 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 MASP1P48740 699 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 TCEA2Q15560 299 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 FILIP1Q7Z7B0 1213 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 DHX37Q8IY37 1157 aaKnown RBP5.37□□□□□ -1.55
CLK1-214ENST00000496205 SCYL1Q96KG9 808 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 CRAMP1Q96RY5 1269 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 DHRS4Q9BTZ2 278 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 ZDHHC5Q9C0B5 715 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 PLA2G3Q9NZ20 509 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 NUB1Q9Y5A7 615 aa5.37□□□□□ -1.55
CLK1-214ENST00000496205 SDSP20132 328 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 POU3F3P20264 500 aaPredicted RBP5.36□□□□□ -1.55
CLK1-214ENST00000496205 MAKP20794 623 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 RPS19P39019 145 aaKnown RBP5.36□□□□□ -1.55
CLK1-214ENST00000496205 AMPD3Q01432 767 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 PABPC4Q13310 644 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLK1-214ENST00000496205 PTPROQ16827 1216 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 KIZQ2M2Z5 673 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 NSMFQ6X4W1 530 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 GPR135Q8IZ08 494 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 CLIP3Q96DZ5 547 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 SLC2A4RGQ9NR83 387 aa5.36□□□□□ -1.55
CLK1-214ENST00000496205 ASXL2Q76L83 1435 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 A0A087X0B3 334 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 FAM90A27PA6NNH2 459 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 PPM1GO15355 546 aaPredicted RBP5.35□□□□□ -1.55
CLK1-214ENST00000496205 KCNQ1P51787 676 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 COL10A1Q03692 680 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 WDR72Q3MJ13 1102 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 TM4SF20Q53R12 229 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 SPTY2D1Q68D10 685 aaPredicted RBP5.35□□□□□ -1.55
CLK1-214ENST00000496205 DPP8Q6V1X1 898 aaPredicted RBP5.35□□□□□ -1.55
CLK1-214ENST00000496205 SCUBE1Q8IWY4 988 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 RPUSD2Q8IZ73 545 aaKnown RBP5.35□□□□□ -1.55
CLK1-214ENST00000496205 SLC7A14Q8TBB6 771 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 DCAF4Q8WV16 495 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 CDC6Q99741 560 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 TRIM39Q9HCM9 518 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 PCDH12Q9NPG4 1184 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 PUF60Q9UHX1 559 aaKnown RBP5.35□□□□□ -1.55
CLK1-214ENST00000496205 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
CLK1-214ENST00000496205 DNAJC6O75061 913 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 PPFIA2O75334 1257 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 SOD2P04179 222 aa5.34□□□□□ -1.55
CLK1-214ENST00000496205 HSP90B1P14625 803 aaKnown RBP5.34□□□□□ -1.55
CLK1-214ENST00000496205 NCLP19338 710 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms