RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SH3RF2Q8TEC5 729 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 TTC1Q99614 292 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 PCIF1Q9H4Z3 704 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 PCDH12Q9NPG4 1184 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 RIC8BQ9NVN3 520 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 PPP4R1LQ9P1A2 415 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 MCM8Q9UJA3 840 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 NPEPPSL1A6NEC2 478 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 C9orf118A6NHY6 69 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 H7C1D1 291 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 B4GALT3O60512 393 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 LTFP02788 710 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 PTPN1P18031 435 aaKnown RBP5.45□□□□□ -1.54
VTA1-204ENST00000491881 ANAPC15P60006 121 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 GRIN1Q05586 938 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 ZNF174Q15697 407 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 PRR31Q5SQ13 230 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 PRAMEF18Q5VWM3 479 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 BTBD8Q5XKL5 378 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 OTOP1Q7RTM1 612 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 C11orf74Q86VG3 221 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 MIB1Q86YT6 1006 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 AFAP1L2Q8N4X5 818 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 ATL2Q8NHH9 583 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 ZNF747Q9BV97 191 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 DEF6Q9H4E7 631 aa5.45□□□□□ -1.54
VTA1-204ENST00000491881 THG1LQ9NWX6 298 aaKnown RBP5.45□□□□□ -1.54
VTA1-204ENST00000491881 NOP58Q9Y2X3 529 aaKnown RBP5.45□□□□□ -1.54
VTA1-204ENST00000491881 PRAMEF25A6NGN4 478 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 CLASP2O75122 1294 aaKnown RBP5.44□□□□□ -1.54
VTA1-204ENST00000491881 AMHP03971 560 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 CYP1A1P04798 512 aaPredicted RBP5.44□□□□□ -1.54
VTA1-204ENST00000491881 KPNA1P52294 538 aaPredicted RBP5.44□□□□□ -1.54
VTA1-204ENST00000491881 EPHA5P54756 1037 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 AMPD3Q01432 767 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 DSG1Q02413 1049 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 CRB2Q5IJ48 1285 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 STRA8Q7Z7C7 330 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 NOSTRINQ8IVI9 506 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 PALM2Q8IXS6 379 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 FAM126BQ8IXS8 530 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 TTLL11Q8NHH1 800 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 CLEC4DQ8WXI8 215 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 TOE1Q96GM8 510 aaKnown RBP5.44□□□□□ -1.54
VTA1-204ENST00000491881 GPATCH3Q96I76 525 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 GPR101Q96P66 508 aaPredicted RBP5.44□□□□□ -1.54
VTA1-204ENST00000491881 BRINP2Q9C0B6 783 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 IFT22Q9H7X7 185 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 KCNH7Q9NS40 1196 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 DTLQ9NZJ0 730 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 TELO2Q9Y4R8 837 aa5.44□□□□□ -1.54
VTA1-204ENST00000491881 BRINP1O60477 761 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 ATP2A2P16615 1042 aaKnown RBP5.43□□□□□ -1.54
VTA1-204ENST00000491881 KIF11P52732 1056 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 IGBP1P78318 339 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 TMEM132BQ14DG7 1078 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 PAN2Q504Q3 1202 aaKnown RBP5.43□□□□□ -1.54
VTA1-204ENST00000491881 FSTL4Q6MZW2 842 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 ZNF585AQ6P3V2 769 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 CIR1Q86X95 450 aaPredicted RBP5.43□□□□□ -1.54
VTA1-204ENST00000491881 PASD1Q8IV76 773 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 CHTF18Q8WVB6 975 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 CD248Q9HCU0 757 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 NGRNQ9NPE2 291 aaKnown RBP5.43□□□□□ -1.54
VTA1-204ENST00000491881 JADE2Q9NQC1 790 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 OXSMQ9NWU1 459 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 ATP8A1Q9Y2Q0 1164 aa5.43□□□□□ -1.54
VTA1-204ENST00000491881 FAM90A27PA6NNH2 459 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 ZEB2O60315 1214 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 FKBP9O95302 570 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 ZBTB48P10074 688 aaPredicted RBP5.42□□□□□ -1.54
VTA1-204ENST00000491881 ADCYAP1R1P41586 468 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 STAT5AP42229 794 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 LSSP48449 732 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 NKX3-2P78367 333 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 ATP13A4Q4VNC1 1196 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 FKBP9P1Q75LS8 142 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 KIAA1958Q8N8K9 716 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 SCYL1Q96KG9 808 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 PCED1AQ9H1Q7 454 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 L2HGDHQ9H9P8 463 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 H2AFY2Q9P0M6 372 aaPredicted RBP5.42□□□□□ -1.54
VTA1-204ENST00000491881 APOBEC2Q9Y235 224 aaKnown RBP5.42□□□□□ -1.54
VTA1-204ENST00000491881 B3GALT1Q9Y5Z6 326 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 HS3ST3A1Q9Y663 406 aa5.42□□□□□ -1.54
VTA1-204ENST00000491881 NEMP1O14524 444 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 PPM1GO15355 546 aaPredicted RBP5.41□□□□□ -1.54
VTA1-204ENST00000491881 GPR42O15529 346 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 FAHP16930 419 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 ZNF28P17035 718 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 BPIP17213 487 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 TMPRSS15P98073 1019 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 TEPPQ6URK8 271 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 DDX42Q86XP3 938 aaKnown RBP eCLIP5.41□□□□□ -1.54
VTA1-204ENST00000491881 ANKRD13AQ8IZ07 590 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
VTA1-204ENST00000491881 WDR66Q8TBY9 1149 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms