RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 AFPP02771 609 aaKnown RBP21.26■□□□□ 0.99
HMG20B-213ENST00000488973 UBE2SQ16763 222 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 ODF2Q5BJF6 829 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 PEX26Q7Z412 305 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 FMNL3Q8IVF7 1028 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 SYCE1Q8N0S2 351 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 MTMR4Q9NYA4 1195 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 ARMCX3Q9UH62 379 aaPredicted RBP21.26■□□□□ 0.99
HMG20B-213ENST00000488973 INTUQ9ULD6 942 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 MRPL12P52815 198 aaKnown RBP21.25■□□□□ 0.99
HMG20B-213ENST00000488973 NPEPPSP55786 919 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 TMC3Q7Z5M5 1100 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 TRAF3IP3Q9Y228 551 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 NPHP3-ACAD11A0A0J9YXS1 232 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 TMCO5BA8MYB1 307 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 PON1P27169 355 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 NEDD9Q14511 834 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 EXOC3L4Q17RC7 722 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 SPDYCQ5MJ68 293 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 VPS36Q86VN1 386 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 GJA10Q969M2 543 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 SLC40A1Q9NP59 571 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 FAM114A2Q9NRY5 505 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 SWAP70Q9UH65 585 aa21.25■□□□□ 0.99
HMG20B-213ENST00000488973 DAPK3O43293 454 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 TMOD1P28289 359 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 FLT3P36888 993 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 C15orf52Q6ZUT6 534 aaKnown RBP21.24■□□□□ 0.99
HMG20B-213ENST00000488973 CCDC114Q96M63 670 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 FAM210AQ96ND0 272 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 JPH2Q9BR39 696 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-213ENST00000488973 JMJD4Q9H9V9 463 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 AMACRQ9UHK6 382 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 LY75O60449 1722 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 H2AFZP0C0S5 128 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 ELF1P32519 619 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 CDR1P51861 262 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 INHBEP58166 350 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 CACNB1Q02641 598 aaPredicted RBP21.24■□□□□ 0.99
HMG20B-213ENST00000488973 H2AFVQ71UI9 128 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 RBM46Q8TBY0 533 aaKnown RBP21.24■□□□□ 0.99
HMG20B-213ENST00000488973 RAPGEF5Q92565 580 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 SEC16BQ96JE7 1060 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 OSBPL7Q9BZF2 842 aa21.24■□□□□ 0.99
HMG20B-213ENST00000488973 CNOT8Q9UFF9 292 aaKnown RBP21.24■□□□□ 0.99
HMG20B-213ENST00000488973 NOVA2Q9UNW9 492 aaKnown RBP21.24■□□□□ 0.99
HMG20B-213ENST00000488973 POTEB3A0JP26 581 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 POTECB2RU33 542 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 KRT18P05783 430 aaKnown RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 RHBDL3P58872 404 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 POTEBQ6S5H4 581 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 P3H4Q92791 437 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 ZKSCAN4Q969J2 545 aaPredicted RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 GPCPD1Q9NPB8 672 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 XRCC5P13010 732 aaKnown RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 RDXP35241 583 aaKnown RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 SLC12A3P55017 1021 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 QPCTQ16769 361 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 ARSHQ5FYA8 562 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 NT5DC3Q86UY8 548 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 ADGRF4Q8IZF3 695 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 CACNA2D3Q8IZS8 1091 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 LRRC47Q8N1G4 583 aaKnown RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 HES6Q96HZ4 224 aa21.23■□□□□ 0.99
HMG20B-213ENST00000488973 CNOT10Q9H9A5 744 aaKnown RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 TTC7AQ9ULT0 858 aaPredicted RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 UTP11Q9Y3A2 253 aaKnown RBP21.23■□□□□ 0.99
HMG20B-213ENST00000488973 PPP1R11O60927 126 aaPredicted RBP21.22■□□□□ 0.99
HMG20B-213ENST00000488973 ITGA4P13612 1032 aa21.22■□□□□ 0.99
HMG20B-213ENST00000488973 EIF3BP55884 814 aaKnown RBP21.22■□□□□ 0.99
HMG20B-213ENST00000488973 JAM2P57087 298 aa21.22■□□□□ 0.99
HMG20B-213ENST00000488973 ANKRD20A8PQ5CZ79 823 aa21.22■□□□□ 0.99
HMG20B-213ENST00000488973 TAX1BP1Q86VP1 789 aa21.22■□□□□ 0.99
HMG20B-213ENST00000488973 TATDN2Q93075 761 aa21.22■□□□□ 0.99
HMG20B-213ENST00000488973 FAM163AQ96GL9 167 aaPredicted RBP21.22■□□□□ 0.99
HMG20B-213ENST00000488973 F8VZ95 297 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 TTI1O43156 1089 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 MAGOHP61326 146 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 ZNF543Q08ER8 600 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 EPHA7Q15375 998 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 KNOP1Q1ED39 458 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 LACTB2Q53H82 288 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 ARHGEF1Q92888 912 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 MAGOHBQ96A72 148 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 MXD3Q9BW11 206 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 DHX36Q9H2U1 1008 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 QTRT2Q9H974 415 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 CD248Q9HCU0 757 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 SRP68Q9UHB9 627 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 ATF5Q9Y2D1 282 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 CALUO43852 315 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 POU5F1Q01860 360 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 DHX9Q08211 1270 aaKnown RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 DAAM2Q86T65 1068 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 PROCA1Q8NCQ7 364 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-213ENST00000488973 BORCS6Q96GS4 357 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 PSMD1Q99460 953 aa21.21■□□□□ 0.99
HMG20B-213ENST00000488973 IGKV6D-41A0A0C4DH26 115 aa21.2■□□□□ 0.99
HMG20B-213ENST00000488973 MPHOSPH10O00566 681 aaKnown RBP21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms