RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 MSMPQ1L6U9 139 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 SLC4A8Q2Y0W8 1093 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 SBK1Q52WX2 424 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 C12orf60Q5U649 245 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 FBXO46Q6PJ61 603 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 C16orf86Q6ZW13 317 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 STRBPQ96SI9 672 aaKnown RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 PUS7LQ9H0K6 701 aaKnown RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 NAPBQ9H115 298 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 HELLSQ9NRZ9 838 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 CACNA2D2Q9NY47 1150 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 PCDHA4Q9UN74 947 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 TRIM17Q9Y577 477 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 MYH4Q9Y623 1939 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 RBBP6Q7Z6E9 1792 aaKnown RBP6.06□□□□□ -1.44
SF3A3-207ENST00000488934 GREB1LQ9C091 1923 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-207ENST00000488934 FANCGO15287 622 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 PAGE1O75459 146 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 IGHDP01880 384 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 PRNPP04156 253 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 CELA3AP09093 270 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 HOXA7P31268 230 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-207ENST00000488934 SHMT1P34896 483 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 RPS26P62854 115 aaKnown RBP6.06□□□□□ -1.44
SF3A3-207ENST00000488934 PDE4BQ07343 736 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 FAM110CQ1W6H9 321 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 CTR9Q6PD62 1173 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 C17orf99Q6UX52 265 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 OTOP1Q7RTM1 612 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 HDXQ7Z353 690 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 STK11IPQ8N1F8 1099 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 GRIN3AQ8TCU5 1115 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 CD99L2Q8TCZ2 262 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 OTUD7AQ8TE49 926 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-207ENST00000488934 LPAR1Q92633 364 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 RILPL2Q969X0 211 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 ISL2Q96A47 359 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 C12orf42Q96LP6 360 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 KIAA1683Q9H0B3 1180 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 MKNK2Q9HBH9 465 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 LAMA4Q16363 1823 aa6.06□□□□□ -1.44
SF3A3-207ENST00000488934 ZMYM6O95789 1325 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 ADGRA2Q96PE1 1338 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 GSG1L2A8MUP6 293 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 DYNC1LI2O43237 492 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-207ENST00000488934 PRKAB2O43741 272 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 CYP2C8P10632 490 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 PCP11498 1178 aaKnown RBP6.05□□□□□ -1.44
SF3A3-207ENST00000488934 CDK8P49336 464 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 ICA1Q05084 483 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 CDK5R2Q13319 367 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 MOGSQ13724 837 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 MCMDC2Q4G0Z9 681 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 TTBK2Q6IQ55 1244 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 NPAS4Q8IUM7 802 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 IFNL3Q8IZI9 196 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 ZNF444Q8N0Y2 327 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-207ENST00000488934 COA7Q96BR5 231 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 MISP3Q96FF7 219 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 KANSL2Q9H9L4 492 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 DIAPH3Q9NSV4 1193 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 PARP2Q9UGN5 583 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 CPA4Q9UI42 421 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 SYNPO2Q9UMS6 1093 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 PTPN22Q9Y2R2 807 aa6.05□□□□□ -1.44
SF3A3-207ENST00000488934 PARP14Q460N5 1801 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CCDC171Q6TFL3 1326 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CCDC85CA6NKD9 419 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 DCDC2CA8MYV0 355 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 MINDY4BA8MYZ0 360 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 M0R2C6 588 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 TNPO2O14787 897 aaKnown RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CENPBP07199 599 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 VCAM1P19320 739 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 PSMC4P43686 418 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CCNA1P78396 465 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 IRX6P78412 446 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 DAB2P98082 770 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 PPARAQ07869 468 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 RRP1BQ14684 758 aaKnown RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 SEPT2Q15019 361 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 ZYXQ15942 572 aaKnown RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 SLC9C1Q4G0N8 1177 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 PPM1JQ5JR12 505 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 TREML2Q5T2D2 321 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 DNAJC14Q6Y2X3 702 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CENPQQ7L2Z9 268 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CCDC84Q86UT8 332 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 CCAR1Q8IX12 1150 aaKnown RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 ANKRD13CQ8N6S4 541 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 MB21D1Q8N884 522 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 AGBL5Q8NDL9 886 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 ZNF507Q8TCN5 953 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 RAET1EQ8TD07 263 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 RUFY2Q8WXA3 655 aa6.04□□□□□ -1.44
SF3A3-207ENST00000488934 GZF1Q9H116 711 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-207ENST00000488934 ASCC2Q9H1I8 757 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms