RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SLC44A3Q8N4M1 653 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 ZSCAN32Q9NX65 697 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 ZNF215Q9UL58 517 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-204ENST00000487252 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.61□□□□□ -0.23
TRIM56-204ENST00000487252 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
TRIM56-204ENST00000487252 LOC400499M0QZD8 3231 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 M0R2C6 588 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 OPLAHO14841 1288 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 RPLP2P05387 115 aaKnown RBP13.6□□□□□ -0.23
TRIM56-204ENST00000487252 FGRP09769 529 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 RFX1P22670 979 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 PDE4AP27815 886 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 ITPR1Q14643 2758 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 N4BP2L1Q5TBK1 243 aaPredicted RBP13.6□□□□□ -0.23
TRIM56-204ENST00000487252 SLC22A17Q8WUG5 538 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
TRIM56-204ENST00000487252 SMG1Q96Q15 3661 aaKnown RBP13.6□□□□□ -0.23
TRIM56-204ENST00000487252 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
TRIM56-204ENST00000487252 DMXL2Q8TDJ6 3036 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-204ENST00000487252 NOP56O00567 594 aaKnown RBP13.59□□□□□ -0.23
TRIM56-204ENST00000487252 LRP3O75074 770 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 PPM1AP35813 382 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 STARD6P59095 220 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 PGM5Q15124 567 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 LETM2Q2VYF4 491 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 KCNT2Q6UVM3 1135 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 KBTBD3Q8NAB2 608 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 GPR152Q8TDT2 470 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 FRAT1Q92837 279 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-204ENST00000487252 NACAP1Q9BZK3 213 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 FOXQ1Q9C009 403 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 TCP11L1Q9NUJ3 509 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 TUBE1Q9UJT0 475 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 TELO2Q9Y4R8 837 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
TRIM56-204ENST00000487252 C9IYK1 514 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 RNF113AO15541 343 aaKnown RBP13.58□□□□□ -0.24
TRIM56-204ENST00000487252 ORC4O43929 436 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 MGEA5O60502 916 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 LRRN2O75325 713 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 MYCLP12524 364 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-204ENST00000487252 EPCAMP16422 314 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 KRT17Q04695 432 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 PAK2Q13177 524 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 NONOQ15233 471 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRIM56-204ENST00000487252 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-204ENST00000487252 IER5Q5VY09 327 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 TMC5Q6UXY8 1006 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 NXPE3Q969Y0 559 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 DDX23Q9BUQ8 820 aaKnown RBP13.58□□□□□ -0.24
TRIM56-204ENST00000487252 SLC2A4RGQ9NR83 387 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 MYH6P13533 1939 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 KDM3AQ9Y4C1 1321 aa13.58□□□□□ -0.24
TRIM56-204ENST00000487252 BPTFQ12830 3046 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 C1QTNF9BB2RNN3 333 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 TM4SF5O14894 197 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 FOXP2O15409 715 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 LAMTOR5O43504 91 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 RANBP6O60518 1105 aaKnown RBP13.57□□□□□ -0.24
TRIM56-204ENST00000487252 C1QTNF9P0C862 333 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
TRIM56-204ENST00000487252 FAM189BP81408 668 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 CSTF1Q05048 431 aaKnown RBP13.57□□□□□ -0.24
TRIM56-204ENST00000487252 SPEM2Q0P670 501 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 GRIK4Q16099 956 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 GPATCH4Q5T3I0 446 aaKnown RBP13.57□□□□□ -0.24
TRIM56-204ENST00000487252 SLC24A5Q71RS6 500 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 NAPBQ9H115 298 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 SFXN1Q9H9B4 322 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 C1orf112Q9NSG2 853 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
TRIM56-204ENST00000487252 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 ANAPC4Q9UJX5 808 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 MRPL11Q9Y3B7 192 aaKnown RBP13.57□□□□□ -0.24
TRIM56-204ENST00000487252 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
TRIM56-204ENST00000487252 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-204ENST00000487252 CTDSPL2Q05D32 466 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 PPFIA1Q13136 1202 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 NEDD9Q14511 834 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 UNQ6494/PRO21346Q6UXR6 183 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 CYFIP1Q7L576 1253 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 SLC39A11Q8N1S5 342 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 ZNF558Q96NG5 402 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
TRIM56-204ENST00000487252 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms