RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 AFF2P51816 1311 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 TM4SF1P30408 202 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 GCKP35557 465 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 SLC1A4P43007 532 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 GLE1Q53GS7 698 aaKnown RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 SLC10A5Q5PT55 438 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 CATIPQ7Z7H3 387 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 UBLCP1Q8WVY7 318 aaPredicted RBP11.06□□□□□ -0.64
COMMD4-203ENST00000480484 CNTNAP5Q8WYK1 1306 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 CNTNAP4Q9C0A0 1308 aa11.06□□□□□ -0.64
COMMD4-203ENST00000480484 LRRC53A6NM62 1247 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 KLRC4O43908 158 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 HIP1RO75146 1068 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 LGR5O75473 907 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 SLC8A1P32418 973 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 UBA7P41226 1012 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 EHHADHQ08426 723 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 KLHDC7AQ5VTJ3 777 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 PPP4R3AQ6IN85 833 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 TCP11Q8WWU5 503 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 HVCN1Q96D96 273 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 RSRC1Q96IZ7 334 aaKnown RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 PYM1Q9BRP8 204 aaKnown RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 DISC1Q9NRI5 854 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 HDAC9Q9UKV0 1011 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 TNRC6CQ9HCJ0 1690 aaKnown RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CCDC85CA6NKD9 419 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 RAD51CO43502 376 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CLTAP09496 248 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 TNFRSF8P28908 595 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CDC25CP30307 473 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CDKN1CP49918 316 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 ARID5AQ03989 594 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 MYO1EQ12965 1108 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 NFIXQ14938 502 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 TMBIM4Q9HC24 238 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 SLC39A2Q9NP94 309 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CASS4Q9NQ75 786 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CCNL1Q9UK58 526 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 PLAGL2Q9UPG8 496 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 PALMO75781 387 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CCNHP51946 323 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 GKAP1Q5VSY0 366 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-203ENST00000480484 TMTC3Q6ZXV5 915 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CACNA2D4Q7Z3S7 1137 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 C4orf32Q8N8J7 132 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 WHAMMQ8TF30 809 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 FGFBP2Q9BYJ0 223 aa11.05□□□□□ -0.64
COMMD4-203ENST00000480484 CENPFP49454 3210 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 ZNF646O15015 1829 aaPredicted RBP11.04□□□□□ -0.64
COMMD4-203ENST00000480484 TRAPPC3O43617 180 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 RPS6KA4O75676 772 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
COMMD4-203ENST00000480484 HSD17B3P37058 310 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 RACK1P63244 317 aaKnown RBP11.04□□□□□ -0.64
COMMD4-203ENST00000480484 DYMQ7RTS9 669 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 EGFL6Q8IUX8 553 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 P2RX5Q93086 422 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 STAMBPL1Q96FJ0 436 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 BCAS3Q9H6U6 928 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 ATP6V0A4Q9HBG4 840 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 NOD2Q9HC29 1040 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 PRM3Q9NNZ6 103 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 MCM9Q9NXL9 1143 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 INPP5FQ9Y2H2 1132 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 LAMB1P07942 1786 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
COMMD4-203ENST00000480484 ASIC1P78348 528 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 POU5F1BQ06416 359 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 CDC37Q16543 378 aaPredicted RBP11.04□□□□□ -0.64
COMMD4-203ENST00000480484 ECM1Q16610 540 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 MIIPQ5JXC2 388 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 FAM114A1Q8IWE2 563 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 CD302Q8IX05 232 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 RAPGEF5Q92565 580 aa11.04□□□□□ -0.64
COMMD4-203ENST00000480484 DCDC2CA8MYV0 355 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 VIL1P09327 827 aaKnown RBP11.03□□□□□ -0.64
COMMD4-203ENST00000480484 FGRP09769 529 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 RCSD1Q6JBY9 416 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 GIMAP8Q8ND71 665 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-203ENST00000480484 MDM1Q8TC05 714 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 TBC1D22AQ8WUA7 517 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 NSMCE1Q8WV22 266 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 RNF34Q969K3 372 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 SPDL1Q96EA4 605 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 PACSIN1Q9BY11 444 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 CRNKL1Q9BZJ0 848 aaKnown RBP11.03□□□□□ -0.64
COMMD4-203ENST00000480484 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
COMMD4-203ENST00000480484 CNOT8Q9UFF9 292 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms