RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MPHOSPH6Q99547 160 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 PAGR1Q9BTK6 254 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 HTATIP2Q9BUP3 242 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 RNF208Q9H0X6 261 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 BCL11AQ9H165 835 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ALDH8A1Q9H2A2 487 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 CNTN3Q9P232 1028 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ADD3Q9UEY8 706 aaKnown RBP5.69□□□□□ -1.5
PTCD3-213ENST00000480102 TRIM33Q9UPN9 1127 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 ABCB11O95342 1321 aa5.69□□□□□ -1.5
PTCD3-213ENST00000480102 CCDC196A0A1B0GTZ2 297 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 A0A1W2PPC1 479 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 RBM47A0AV96 593 aaKnown RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 B4E1Z4 1266 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 H3BRB1 525 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 NKRFO15226 690 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 NMT2O60551 498 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 ICMTO60725 284 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 DUSP11O75319 330 aaKnown RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 STAM2O75886 525 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 PARP1P09874 1014 aaKnown RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 ZNF865P0CJ78 1059 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 CYP2B6P20813 491 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 HAND2P61296 217 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 EHHADHQ08426 723 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 ADGRE1Q14246 886 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 GRM4Q14833 912 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 SNX17Q15036 470 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 CREB3L3Q68CJ9 461 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 MCTP2Q6DN12 878 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 XRRA1Q6P2D8 792 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 SHISA2Q6UWI4 295 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 FAM43BQ6ZT52 329 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 NECAB2Q7Z6G3 386 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 CATIPQ7Z7H3 387 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 NCAPG2Q86XI2 1143 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 FBXO11Q86XK2 927 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 CACTIN-AS1Q8N1I8 211 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 ANKRD35Q8N283 1001 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 IL22RA1Q8N6P7 574 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 C1orf127Q8N9H9 656 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 SH3TC2Q8TF17 1288 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 LENG1Q96BZ8 264 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 NEK1Q96PY6 1258 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 IWS1Q96ST2 819 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 MMP19Q99542 508 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 KATNBL1Q9H079 304 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 GLT8D2Q9H1C3 349 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 TUT1Q9H6E5 874 aaKnown RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 LY9Q9HBG7 655 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 VTA1Q9NP79 307 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 TOMM22Q9NS69 142 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 CYP39A1Q9NYL5 469 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 DDX20Q9UHI6 824 aaKnown RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 MAD2L2Q9UI95 211 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 MRPL11Q9Y3B7 192 aaKnown RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 RIPK3Q9Y572 518 aa5.68□□□□□ -1.5
PTCD3-213ENST00000480102 CTDP1Q9Y5B0 961 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-213ENST00000480102 PNMA6FA0A0J9YX94 578 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 SH2B2O14492 632 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 IFIT3O14879 490 aaKnown RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 ADAM23O75077 832 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 DEAF1O75398 565 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CABYRO75952 493 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 SNAI1O95863 264 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 TGFB3P10600 412 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 AKR1A1P14550 325 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CES1P23141 567 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 HSD17B4P51659 736 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 ANTXR2P58335 489 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 NRG1Q02297 640 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 MBTPS1Q14703 1052 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 WTAPQ15007 396 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 RRP12Q5JTH9 1297 aaKnown RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 KCNV1Q6PIU1 500 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 STOX1Q6ZVD7 989 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 SND1Q7KZF4 910 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CYB5R4Q7L1T6 521 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 GLYCTKQ8IVS8 523 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 GJD3Q8N144 294 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CEP120Q8N960 986 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 NPLOC4Q8TAT6 608 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CLEC4DQ8WXI8 215 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CHMP4CQ96CF2 233 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 FGD4Q96M96 766 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 DEFB118Q96PH6 123 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 NUP88Q99567 741 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 AMNQ9BXJ7 453 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 UPF3AQ9H1J1 476 aaKnown RBP5.67□□□□□ -1.5
PTCD3-213ENST00000480102 RASSF4Q9H2L5 321 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CHRDQ9H2X0 955 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
PTCD3-213ENST00000480102 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms