RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 IFT74Q96LB3 600 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 OSBPL10Q9BXB5 764 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 ORC4O43929 436 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 MMP10P09238 476 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 SRGNP10124 158 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 PPP4CP60510 307 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 SSRP1Q08945 709 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 BCL2A1Q16548 175 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 RTN1Q16799 776 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 KRI1Q8N9T8 703 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TTLL3Q9Y4R7 772 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TNKSO95271 1327 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ANO9A1A5B4 782 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 KDM1AO60341 852 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 IFNAR1P17181 557 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 RXRAP19793 462 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 CDC27P30260 824 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 PDE1BQ01064 536 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MCL1Q07820 350 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 LRRC49Q8IUZ0 686 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 LENG1Q96BZ8 264 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 FAM136AQ96C01 138 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 GPR101Q96P66 508 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ZSCAN10Q96SZ4 725 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 CGREF1Q99674 301 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ALG1Q9BT22 464 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 RABL2AQ9UBK7 228 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MROH7-TTC4A0A0A0MT08 1334 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MYH8P13535 1937 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 CCDC162PA2VCL2 907 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ASAP2O43150 1006 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 PDHA1P08559 390 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 PLCG2P16885 1265 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 DRD4P21917 467 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 FUT4P22083 530 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 CLCN2P51788 898 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MTTPP55157 894 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 BIRC3Q13489 604 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 ARHGEF10LQ9HCE6 1279 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 MCM9Q9NXL9 1143 aa13.72□□□□□ -0.21
RTFDC1-207ENST00000477573 LAMB1P07942 1786 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 HNRNPRO43390 633 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 ACTN4O43707 911 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 AKR1B10O60218 316 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 CALM1P0DP23 149 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 CALM2P0DP24 149 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 CALM3P0DP25 149 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 VARSP26640 1264 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 PEX5P50542 639 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 NDUFA8P51970 172 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 VAV2P52735 878 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 NTRK3Q16288 839 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 IFIT1BQ5T764 474 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 LRIG3Q6UXM1 1119 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 CENPTQ96BT3 561 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 USP28Q96RU2 1077 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 COA1Q9GZY4 146 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 HAUS4Q9H6D7 363 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 PCDHA7Q9UN72 937 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 LRCH1Q9Y2L9 728 aa13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-207ENST00000477573 MYH2Q9UKX2 1941 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 CYP2D7A0A087X1C5 515 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 RAD21O60216 631 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 ASLP04424 464 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 PORP16435 677 aaPredicted RBP13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 ZNF18P17022 549 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 MSH2P43246 934 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 SEC23AQ15436 765 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 FANCBQ8NB91 859 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 CAGE1Q8TC20 777 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 USP33Q8TEY7 942 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 IFT81Q8WYA0 676 aa13.71□□□□□ -0.22
RTFDC1-207ENST00000477573 MYL10Q9BUA6 226 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms