RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 CAGE1Q8TC20 777 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
CLRN1-205ENST00000472224 LMBR1Q8WVP7 490 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 SLC5A5Q92911 643 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 WNT8BQ93098 351 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 CTAGE1Q96RT6 745 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 ZNF302Q9NR11 478 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 LOXHD1Q8IVV2 1947 aa13.4□□□□□ -0.26
CLRN1-205ENST00000472224 CFAP54Q96N23 3096 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 CYP3A7-CYP3A51PA0A087WV96 503 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 WDR64B1ANS9 1081 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 LPXNO60711 386 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 PSAPP07602 524 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 CTSHP09668 335 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 CYP3A7P24462 503 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 THPOP40225 353 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 CLCN6P51797 869 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 PLCB4Q15147 1175 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 SWSAP1Q6NVH7 229 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 ABHD15Q6UXT9 468 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 LRRC8DQ7L1W4 858 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 SPRED2Q7Z698 418 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 SMAP1Q8IYB5 467 aaPredicted RBP13.39□□□□□ -0.27
CLRN1-205ENST00000472224 ETNPPLQ8TBG4 499 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 RIT2Q99578 217 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
CLRN1-205ENST00000472224 UNC45AQ9H3U1 944 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 SMC3Q9UQE7 1217 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 BRWD1Q9NSI6 2320 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 SIP14410 1827 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
CLRN1-205ENST00000472224 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 ZBBXA8MT70 800 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
CLRN1-205ENST00000472224 IQCF3P0C7M6 154 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 CKBP12277 381 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 SELPP16109 830 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 GJB2P29033 226 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 JAK3P52333 1124 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 TAP1Q03518 808 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 PPP4R3AQ6IN85 833 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 MIER3Q7Z3K6 550 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 SERINC5Q86VE9 423 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 AFAP1L1Q8TED9 768 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 TRAPPC12Q8WVT3 735 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 ZBTB10Q96DT7 871 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLRN1-205ENST00000472224 DISC1Q9NRI5 854 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
CLRN1-205ENST00000472224 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 WNT7AO00755 349 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
CLRN1-205ENST00000472224 PSMD10O75832 226 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 GABBR2O75899 941 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 ATG7O95352 703 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 INSRRP14616 1297 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 HOXC8P31273 242 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 GRB10Q13322 594 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 CALCRLQ16602 461 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
CLRN1-205ENST00000472224 FBXO18Q8NFZ0 1043 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
CLRN1-205ENST00000472224 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
CLRN1-205ENST00000472224 MICAL3Q7RTP6 2002 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 IGSF9BQ9UPX0 1349 aa13.37□□□□□ -0.27
CLRN1-205ENST00000472224 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 RRN3P2A6NIE6 340 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 H3BQV1 296 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 NEMFO60524 1076 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
CLRN1-205ENST00000472224 SFNP31947 248 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 MCM7P33993 719 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 RFC2P35250 354 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 SLC26A2P50443 739 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 PRKCEQ02156 737 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 RBL2Q08999 1139 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 UGCGQ16739 394 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 TRIM71Q2Q1W2 868 aaKnown RBP13.36□□□□□ -0.27
CLRN1-205ENST00000472224 ZNF618Q5T7W0 954 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 ATP8B4Q8TF62 1192 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
CLRN1-205ENST00000472224 FAM20AQ96MK3 541 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 FOXP1Q9H334 677 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-205ENST00000472224 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 ZNF318Q5VUA4 2279 aa13.36□□□□□ -0.27
CLRN1-205ENST00000472224 RSPH10B2B2RC85 870 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms