RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 UNC45AQ9H3U1 944 aa16.1■□□□□ 0.17
CBWD3-205ENST00000469687 VCPKMTQ9H867 229 aa16.1■□□□□ 0.17
CBWD3-205ENST00000469687 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
CBWD3-205ENST00000469687 SYNPO2Q9UMS6 1093 aa16.1■□□□□ 0.17
CBWD3-205ENST00000469687 SYF2O95926 243 aaKnown RBP16.09■□□□□ 0.17
CBWD3-205ENST00000469687 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
CBWD3-205ENST00000469687 MCM3P25205 808 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 LMAN1P49257 510 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.09■□□□□ 0.17
CBWD3-205ENST00000469687 SPAG5Q96R06 1193 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 FIZ1Q96SL8 496 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 GOLPH3Q9H4A6 298 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 TUFT1Q9NNX1 390 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 OLFML3Q9NRN5 406 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 STK24Q9Y6E0 443 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 DDX39AO00148 427 aaKnown RBP16.09■□□□□ 0.17
CBWD3-205ENST00000469687 VIL1P09327 827 aaKnown RBP16.09■□□□□ 0.17
CBWD3-205ENST00000469687 PRELPP51888 382 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 MAP9Q49MG5 647 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 PLEKHA4Q9H4M7 779 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 GCNT4Q9P109 453 aa16.09■□□□□ 0.17
CBWD3-205ENST00000469687 GRID2IPA4D2P6 1211 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 EN1Q05925 392 aaPredicted RBP16.08■□□□□ 0.16
CBWD3-205ENST00000469687 ITIH3Q06033 890 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 LDHDQ86WU2 507 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 BANK1Q8NDB2 785 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 AENQ8WTP8 325 aaKnown RBP16.08■□□□□ 0.16
CBWD3-205ENST00000469687 AGBL1Q96MI9 1066 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 ZNF577Q9BSK1 485 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 PKD2L1Q9P0L9 805 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 PCDHGC5Q9Y5F6 944 aa16.08■□□□□ 0.16
CBWD3-205ENST00000469687 RPL13P26373 211 aaKnown RBP16.07■□□□□ 0.16
CBWD3-205ENST00000469687 PTPROQ16827 1216 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 TXLNBQ8N3L3 684 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 FAM71BQ8TC56 605 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 CHURC1Q8WUH1 139 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 VIPAS39Q9H9C1 493 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 PARVGQ9HBI0 331 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 SLC16A3O15427 465 aaKnown RBP16.07■□□□□ 0.16
CBWD3-205ENST00000469687 GAP43P17677 238 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 PAFAH1B1P43034 410 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 HNRNPH2P55795 449 aaKnown RBP16.07■□□□□ 0.16
CBWD3-205ENST00000469687 RNASE9P60153 205 aaKnown RBP16.07■□□□□ 0.16
CBWD3-205ENST00000469687 DGKZQ13574 1117 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 HSP90B2PQ58FF3 399 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 OGFOD1Q8N543 542 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 COL20A1Q9P218 1284 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 MRPL11Q9Y3B7 192 aaKnown RBP16.07■□□□□ 0.16
CBWD3-205ENST00000469687 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
CBWD3-205ENST00000469687 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 AGPSO00116 658 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 CAP2P40123 477 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 AARSP49588 968 aaKnown RBP eCLIP16.06■□□□□ 0.16
CBWD3-205ENST00000469687 JAM2P57087 298 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-205ENST00000469687 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 IL31RAQ8NI17 732 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 LXNQ9BS40 222 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
CBWD3-205ENST00000469687 LUC7LQ9NQ29 371 aaKnown RBP16.06■□□□□ 0.16
CBWD3-205ENST00000469687 NAGPAQ9UK23 515 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 FAM170AA1A519 330 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 EIF3DO15371 548 aaKnown RBP eCLIP16.06■□□□□ 0.16
CBWD3-205ENST00000469687 RNF40O75150 1001 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 ITGB5P18084 799 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 INPP5BP32019 993 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 GGCXP38435 758 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 B3GNT9Q6UX72 402 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 MAEAQ7L5Y9 396 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 ZNF720Q7Z2F6 126 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 FAM186BQ8IYM0 893 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 TTLL6Q8N841 843 aa16.06■□□□□ 0.16
CBWD3-205ENST00000469687 CCDC66A2RUB6 948 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 ZSCAN5CA6NGD5 496 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-205ENST00000469687 IPO5O00410 1097 aaKnown RBP16.05■□□□□ 0.16
CBWD3-205ENST00000469687 NFIBO00712 420 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 CYP2J2P51589 502 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 PLS1Q14651 629 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 GRIPAP1Q4V328 841 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
CBWD3-205ENST00000469687 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 FAM204AQ9H8W3 233 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 STIM2Q9P246 746 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 FER1L6Q2WGJ9 1857 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 ZNF536O15090 1300 aa16.05■□□□□ 0.16
CBWD3-205ENST00000469687 TRIM49P0CI25 452 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 TRIM49CP0CI26 452 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 ZNF131P52739 623 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms