RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 FAM86B2P0C5J1 330 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 CALCRLQ16602 461 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 SP7Q8TDD2 431 aaPredicted RBP19.63■□□□□ 0.73
CPSF4-209ENST00000465132 SEPT8Q92599 483 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 RIT2Q99578 217 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 C17orf80Q9BSJ5 609 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 RAB34Q9BZG1 259 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 SETD4Q9NVD3 440 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 NFASCO94856 1347 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 IGLV3-22A0A075B6J6 115 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 IPO5O00410 1097 aaKnown RBP19.62■□□□□ 0.73
CPSF4-209ENST00000465132 CTSHP09668 335 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 GNAT1P11488 350 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 MCM7P33993 719 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 TMEM266Q2M3C6 531 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 EARS2Q5JPH6 523 aaKnown RBP19.62■□□□□ 0.73
CPSF4-209ENST00000465132 TRIM50Q86XT4 487 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 FBXO22Q8NEZ5 403 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 OSBPL7Q9BZF2 842 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 ZNF215Q9UL58 517 aaPredicted RBP19.62■□□□□ 0.73
CPSF4-209ENST00000465132 TELO2Q9Y4R8 837 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 STK24Q9Y6E0 443 aa19.62■□□□□ 0.73
CPSF4-209ENST00000465132 MYH15Q9Y2K3 1946 aa19.61■□□□□ 0.73
CPSF4-209ENST00000465132 TDP2O95551 362 aa19.61■□□□□ 0.73
CPSF4-209ENST00000465132 DDIT3P35638 169 aa19.61■□□□□ 0.73
CPSF4-209ENST00000465132 ADAM17P78536 824 aa19.61■□□□□ 0.73
CPSF4-209ENST00000465132 TOP1MTQ969P6 601 aa19.61■□□□□ 0.73
CPSF4-209ENST00000465132 AGO4Q9HCK5 861 aaKnown RBP19.61■□□□□ 0.73
CPSF4-209ENST00000465132 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.6■□□□□ 0.73
CPSF4-209ENST00000465132 FAM205CA6NFA0 338 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 GAS7O60861 476 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 PRPHP41219 470 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 KRT76Q01546 638 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 ZNF174Q15697 407 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 UTP14CQ5TAP6 766 aaKnown RBP19.6■□□□□ 0.73
CPSF4-209ENST00000465132 ARL6IP4Q66PJ3 421 aaKnown RBP19.6■□□□□ 0.73
CPSF4-209ENST00000465132 LMBR1Q8WVP7 490 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 TEKT3Q9BXF9 490 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 UBE2ZQ9H832 354 aaPredicted RBP19.6■□□□□ 0.73
CPSF4-209ENST00000465132 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.6■□□□□ 0.73
CPSF4-209ENST00000465132 SIP14410 1827 aa19.6■□□□□ 0.73
CPSF4-209ENST00000465132 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-209ENST00000465132 MSH4O15457 936 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 OR52Z1P0C646 297 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 KRT85P78386 507 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 SP4Q02446 784 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 FAM26DQ5JW98 314 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 LRCH2Q5VUJ6 765 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 CYP2W1Q8TAV3 490 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 SLC5A5Q92911 643 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 YME1L1Q96TA2 773 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 EPHX3Q9H6B9 360 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 JPH1Q9HDC5 661 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-209ENST00000465132 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 MICAL3Q7RTP6 2002 aa19.59■□□□□ 0.73
CPSF4-209ENST00000465132 ARP10275 920 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 SFNP31947 248 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 TOB1P50616 345 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-209ENST00000465132 EPC2Q52LR7 807 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 FOXD4L5Q5VV16 416 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-209ENST00000465132 ZNF746Q6NUN9 644 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-209ENST00000465132 SMAP1Q8IYB5 467 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-209ENST00000465132 RDM1Q8NG50 284 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 FOXD4L4Q8WXT5 416 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-209ENST00000465132 APBB2Q92870 758 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 LENG9Q96B70 501 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 MRPL38Q96DV4 380 aaKnown RBP19.58■□□□□ 0.72
CPSF4-209ENST00000465132 SAMD11Q96NU1 681 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 KCNMB3Q9NPA1 279 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 SLC9A2Q9UBY0 812 aa19.58■□□□□ 0.72
CPSF4-209ENST00000465132 NRCAMQ92823 1304 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 ATP9AO75110 1047 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 UPP2O95045 317 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 KCNA2P16389 499 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 JAK3P52333 1124 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 PTGDRQ13258 359 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 SF3A1Q15459 793 aaKnown RBP19.57■□□□□ 0.72
CPSF4-209ENST00000465132 PTPROQ16827 1216 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 CSPP1Q1MSJ5 1256 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 LEXMQ3ZCV2 418 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 DTHD1Q6ZMT9 781 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 ETNPPLQ8TBG4 499 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 TNPO1Q92973 898 aaKnown RBP19.57■□□□□ 0.72
CPSF4-209ENST00000465132 IFIH1Q9BYX4 1025 aaKnown RBP19.57■□□□□ 0.72
CPSF4-209ENST00000465132 SCAND2PQ9GZW5 306 aaPredicted RBP19.57■□□□□ 0.72
CPSF4-209ENST00000465132 PCDHB6Q9Y5E3 794 aa19.57■□□□□ 0.72
CPSF4-209ENST00000465132 MORC2Q9Y6X9 1032 aaPredicted RBP19.57■□□□□ 0.72
CPSF4-209ENST00000465132 SLC37A4O43826 429 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 DKC1O60832 514 aaKnown RBP eCLIP19.56■□□□□ 0.72
CPSF4-209ENST00000465132 YEATS4O95619 227 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 KCNA5P22460 613 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 TCF7P36402 384 aaPredicted RBP19.56■□□□□ 0.72
CPSF4-209ENST00000465132 ATP2C1P98194 919 aaPredicted RBP19.56■□□□□ 0.72
CPSF4-209ENST00000465132 PKP1Q13835 747 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 STK38Q15208 465 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 RPAINQ86UA6 219 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 TMEM192Q8IY95 271 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 ERMNQ8TAM6 284 aa19.56■□□□□ 0.72
CPSF4-209ENST00000465132 KCNG4Q8TDN1 519 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms