RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.53■□□□□ 0.562e-7■■□□□ 13.5
ACTB-207ENST00000462494 AJAP1Q9UKB5 411 aaPredicted RBP18.53■□□□□ 0.56
ACTB-207ENST00000462494 NFU1Q9UMS0 254 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 BZW2Q9Y6E2 419 aaKnown RBP18.53■□□□□ 0.56
ACTB-207ENST00000462494 SMCHD1A6NHR9 2005 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 IGLV3-22A0A075B6J6 115 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 HSF2BPO75031 334 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 RPS6KA5O75582 802 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
ACTB-207ENST00000462494 CYP3A4P08684 503 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 RPS6KA1Q15418 735 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 BMT2Q1RMZ1 405 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 ZC2HC1CQ53FD0 456 aaPredicted RBP18.53■□□□□ 0.56
ACTB-207ENST00000462494 C10orf76Q5T2E6 689 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 ALKBH5Q6P6C2 394 aaKnown RBP18.53■□□□□ 0.56
ACTB-207ENST00000462494 BTNL9Q6UXG8 535 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 KSR1Q8IVT5 923 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 SLC35C1Q96A29 364 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 NAGPAQ9UK23 515 aa18.53■□□□□ 0.56
ACTB-207ENST00000462494 TCP10L2B9ZVM9 353 aa18.52■□□□□ 0.56
ACTB-207ENST00000462494 TULP2O00295 520 aa18.52■□□□□ 0.56
ACTB-207ENST00000462494 SLC16A3O15427 465 aaKnown RBP18.52■□□□□ 0.56
ACTB-207ENST00000462494 IRX5P78411 483 aaPredicted RBP18.52■□□□□ 0.56
ACTB-207ENST00000462494 OTOP1Q7RTM1 612 aa18.52■□□□□ 0.56
ACTB-207ENST00000462494 LCMT1Q9UIC8 334 aa18.52■□□□□ 0.56
ACTB-207ENST00000462494 PIK3CDO00329 1044 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 TGFB1I1O43294 461 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 SLITRK3O94933 977 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 TNFRSF8P28908 595 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 CHRNA5P30532 468 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 KLHL7Q8IXQ5 586 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 ACER1Q8TDN7 264 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 CAVIN3Q969G5 261 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 INPP4AQ96PE3 977 aaPredicted RBP18.51■□□□□ 0.55
ACTB-207ENST00000462494 HSD17B14Q9BPX1 270 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 RSPH14Q9UHP6 348 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 ENTPD3O75355 529 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 FLOT1O75955 427 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 GAP43P17677 238 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 CC2D2BQ6DHV5 1058 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 SIX2Q9NPC8 291 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 GDF3Q9NR23 364 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 OLFML3Q9NRN5 406 aa18.51■□□□□ 0.55
ACTB-207ENST00000462494 OPA1O60313 960 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 GFPT2O94808 682 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 FAM153BP0C7A2 387 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 GUCY2FP51841 1108 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 COG2Q14746 738 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 ZYXQ15942 572 aaKnown RBP18.5■□□□□ 0.55
ACTB-207ENST00000462494 FAM153CQ494X1 144 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 FAM186BQ8IYM0 893 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 USP38Q8NB14 1042 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 ARHGEF10LQ9HCE6 1279 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 FAM153AQ9UHL3 310 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 BRWD3Q6RI45 1802 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 BTNL10A8MVZ5 291 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 GOLGA8KD6RF30 607 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 GCOM1H8Y6P7 765 aaPredicted RBP18.5■□□□□ 0.55
ACTB-207ENST00000462494 APBA3O96018 575 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 POLR2MP0CAP2 368 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 PAK2Q13177 524 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 IFI16Q16666 785 aaKnown RBP18.5■□□□□ 0.55
ACTB-207ENST00000462494 ALS2CLQ60I27 953 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 VPS36Q86VN1 386 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 PARVGQ9HBI0 331 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 TUFT1Q9NNX1 390 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 ATRNL1Q5VV63 1379 aa18.5■□□□□ 0.55
ACTB-207ENST00000462494 TMCO5BA8MYB1 307 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 PPP1R12BO60237 982 aaPredicted RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 CEP104O60308 925 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 GAS7O60861 476 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 PSMD10O75832 226 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 KIF4AO95239 1232 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 PSMC2P35998 433 aaKnown RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 TRADDQ15628 312 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 DNAJC21Q5F1R6 531 aaKnown RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 C1orf186Q6ZWK4 172 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 CCDC43Q96MW1 224 aaKnown RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 RRP15Q9Y3B9 282 aaKnown RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 ZMYM2Q9UBW7 1377 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 FAM170AA1A519 330 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 RAD51CO43502 376 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 PRKCIP41743 596 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 JAM2P57087 298 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 TNNC1P63316 161 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 PPFIA1Q13136 1202 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 SRLQ86TD4 932 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 U2AF1L4Q8WU68 220 aaKnown RBP18.49■□□□□ 0.55
ACTB-207ENST00000462494 CASKIN2Q8WXE0 1202 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 ARL8AQ96BM9 186 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 ZIM3Q96PE6 472 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 SH3GL2Q99962 352 aa18.49■□□□□ 0.55
ACTB-207ENST00000462494 SHTN1A0MZ66 631 aa18.48■□□□□ 0.55
ACTB-207ENST00000462494 EIF3DO15371 548 aaKnown RBP eCLIP18.48■□□□□ 0.55
ACTB-207ENST00000462494 CYP2J2P51589 502 aa18.48■□□□□ 0.55
ACTB-207ENST00000462494 GOPCQ9HD26 462 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms