RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PAK2Q13177 524 aa21.42■■□□□ 1.02
VARS-220ENST00000461874 COL4A6Q14031 1691 aa21.42■■□□□ 1.02
VARS-220ENST00000461874 AAK1Q2M2I8 961 aa21.42■■□□□ 1.02
VARS-220ENST00000461874 TRMT1LQ7Z2T5 733 aaKnown RBP21.42■■□□□ 1.02
VARS-220ENST00000461874 RC3H2Q9HBD1 1191 aaKnown RBP21.42■■□□□ 1.02
VARS-220ENST00000461874 H3BNC9 293 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 TDP2O95551 362 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 LRCH2Q5VUJ6 765 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 CRIPAKQ8N1N5 446 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 FIBCD1Q8N539 461 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 ADAMTS19Q8TE59 1207 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 HLA-CQ95604 372 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 GJA10Q969M2 543 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 FAM167AQ96KS9 214 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 MBOAT7Q96N66 472 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 TEKT3Q9BXF9 490 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 CDHR5Q9HBB8 845 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 KCNJ14Q9UNX9 436 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 CEP131Q9UPN4 1083 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 TTC3P53804 2025 aa21.41■■□□□ 1.02
VARS-220ENST00000461874 COL4A4P53420 1690 aaPredicted RBP21.4■■□□□ 1.02
VARS-220ENST00000461874 MUC3AQ02505 3323 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 STK36Q9NRP7 1315 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 ZNF862O60290 1169 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 PSMD10O75832 226 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 DGKIO75912 1065 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 BMP1P13497 986 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 SFNP31947 248 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 JAK3P52333 1124 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 NONOQ15233 471 aaKnown RBP eCLIP21.4■■□□□ 1.02
VARS-220ENST00000461874 ANKRD1Q15327 319 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 TMEM266Q2M3C6 531 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 MOXD1Q6UVY6 613 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 FAM43BQ6ZT52 329 aaPredicted RBP21.4■■□□□ 1.02
VARS-220ENST00000461874 KRT25Q7Z3Z0 450 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 ZNF689Q96CS4 500 aaPredicted RBP21.4■■□□□ 1.02
VARS-220ENST00000461874 MRPL38Q96DV4 380 aaKnown RBP21.4■■□□□ 1.02
VARS-220ENST00000461874 PHF20Q9BVI0 1012 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 TMX1Q9H3N1 280 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 UNC45AQ9H3U1 944 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 GINS2Q9Y248 185 aa21.4■■□□□ 1.02
VARS-220ENST00000461874 BRWD1Q9NSI6 2320 aa21.39■■□□□ 1.02
VARS-220ENST00000461874 ADGRA3Q8IWK6 1321 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 MAGEB2O15479 319 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 CHMP2AO43633 222 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 LINC00271P0C7V0 271 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 AK2P54819 239 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 GPM6BQ13491 265 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 PTPROQ16827 1216 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 METTL13Q8N6R0 699 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 TMEM40Q8WWA1 233 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 ERVK-5Q9HDB9 667 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 NRBP2Q9NSY0 501 aa21.39■■□□□ 1.01
VARS-220ENST00000461874 NOC2LQ9Y3T9 749 aaKnown RBP21.39■■□□□ 1.01
VARS-220ENST00000461874 TNFRSF10AO00220 468 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 RPS6KA5O75582 802 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 CTDNEP1O95476 244 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 OATP04181 439 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 KCNQ1P51787 676 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 CRYBB1P53674 252 aaPredicted RBP21.38■■□□□ 1.01
VARS-220ENST00000461874 NFX1Q12986 1120 aaKnown RBP21.38■■□□□ 1.01
VARS-220ENST00000461874 UGCGQ16739 394 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 INF2Q27J81 1249 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 B3GNT9Q6UX72 402 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 NPAS4Q8IUM7 802 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 RDM1Q8NG50 284 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 ETNPPLQ8TBG4 499 aa21.38■■□□□ 1.01
VARS-220ENST00000461874 CLP1Q92989 425 aaKnown RBP21.38■■□□□ 1.01
VARS-220ENST00000461874 UHRF1Q96T88 793 aaPredicted RBP21.38■■□□□ 1.01
VARS-220ENST00000461874 C5orf67F2Z3F1 127 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 EIF5BO60841 1220 aaKnown RBP21.37■■□□□ 1.01
VARS-220ENST00000461874 DTNBO60941 627 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 GPR32O75388 356 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 RB1P06400 928 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 XBP1P17861 261 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 CTNNB1P35222 781 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 BMPR1AP36894 532 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 PRKCEQ02156 737 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 BTG3Q14201 252 aaPredicted RBP21.37■■□□□ 1.01
VARS-220ENST00000461874 KIZQ2M2Z5 673 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 LINC01465Q8N7H1 131 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 DDX25Q9UHL0 483 aaKnown RBP21.37■■□□□ 1.01
VARS-220ENST00000461874 ST3GAL5Q9UNP4 418 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 RWDD3Q9Y3V2 267 aa21.37■■□□□ 1.01
VARS-220ENST00000461874 MYH9P35579 1960 aaKnown RBP21.36■■□□□ 1.01
VARS-220ENST00000461874 CCDC194A0A1B0GVG4 234 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 VTNP04004 478 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 STAG3L1P0CL83 205 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 CLCN3P51790 818 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 ODR4Q5SWX8 454 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 EFCAB12Q6NXP0 572 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 MIER3Q7Z3K6 550 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 PPP1R16BQ96T49 567 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 OSMRQ99650 979 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 GJB4Q9NTQ9 266 aa21.36■■□□□ 1.01
VARS-220ENST00000461874 ORC3Q9UBD5 711 aaPredicted RBP21.36■■□□□ 1.01
VARS-220ENST00000461874 GPR182O15218 404 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 MGEA5O60502 916 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 TMOD1P28289 359 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms