RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 ZNF775Q96BV0 537 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 SAMD11Q96NU1 681 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 NEK1Q96PY6 1258 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 YME1L1Q96TA2 773 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 IFIH1Q9BYX4 1025 aaKnown RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 GLT8D2Q9H1C3 349 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 JPH1Q9HDC5 661 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 MTUS1Q9ULD2 1270 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 PCDHA6Q9UN73 950 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 PCDHA8Q9Y5H6 950 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 UBIAD1Q9Y5Z9 338 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 ATP9AO75110 1047 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 CDC45O75419 566 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 RPIAP49247 311 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 ADCY7P51828 1080 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 RCAN1P53805 252 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 NAPAP54920 295 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 COL9A3Q14050 684 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-220ENST00000461409 GRIK4Q16099 956 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 PTPROQ16827 1216 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 SPRED2Q7Z698 418 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 TOP1MTQ969P6 601 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 AZI2Q9H6S1 392 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 RIC8AQ9NPQ8 531 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 JADE2Q9NQC1 790 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 TUBE1Q9UJT0 475 aa9.93□□□□□ -0.82
HDAC9-220ENST00000461409 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 GSTTP1A0A1W2PQM5 241 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 MBLAC1A4D2B0 266 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-220ENST00000461409 RRN3P2A6NIE6 340 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 MARK3P27448 753 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 KCNQ1P51787 676 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PRR20EP86478 221 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PRR20CP86479 221 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PRR20DP86480 221 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PRR20BP86481 221 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PRR20AP86496 221 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 FGD1P98174 961 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 EXOSC10Q01780 885 aaKnown RBP9.92□□□□□ -0.82
HDAC9-220ENST00000461409 WWC2Q6AWC2 1192 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 MXRA8Q9BRK3 442 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 SDF4Q9BRK5 362 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 KCNH7Q9NS40 1196 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 SLC9A2Q9UBY0 812 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 TELO2Q9Y4R8 837 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 PTPRSQ13332 1948 aa9.92□□□□□ -0.82
HDAC9-220ENST00000461409 NFASCO94856 1347 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 COL4A4P53420 1690 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-220ENST00000461409 COL4A6Q14031 1691 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 KLF18A0A0U1RQI7 1052 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 CCDC196A0A1B0GTZ2 297 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-220ENST00000461409 GOLGA8AA7E2F4 631 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 GOLGA8BA8MQT2 603 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 M0QZ92 97 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 GDF9O60383 454 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 UPP2O95045 317 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 CHRNA1P02708 482 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 NDUFV2P19404 249 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 SLC26A2P50443 739 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 AP3B2Q13367 1082 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 EPC2Q52LR7 807 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 TIGD5Q53EQ6 642 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 CEP55Q53EZ4 464 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 RUFY4Q6ZNE9 571 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 MRPL38Q96DV4 380 aaKnown RBP9.91□□□□□ -0.82
HDAC9-220ENST00000461409 IL17RAQ96F46 866 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 C17orf80Q9BSJ5 609 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 BARHL2Q9NY43 387 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 BRPF3Q9ULD4 1205 aa9.91□□□□□ -0.82
HDAC9-220ENST00000461409 SMCO2A6NFE2 343 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 STXBP3O00186 592 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 DGAT1O75907 488 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 GHRP10912 638 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 ZNF76P36508 570 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 SREBF1P36956 1147 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 ACTR2P61160 394 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 MRPS6P82932 125 aaKnown RBP9.9□□□□□ -0.82
HDAC9-220ENST00000461409 LPIN1Q14693 890 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 IER5Q5VY09 327 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 MCTP2Q6DN12 878 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 FAM43BQ6ZT52 329 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-220ENST00000461409 NIPA1Q7RTP0 329 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 PLPPR4Q7Z2D5 763 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 CCDC12Q8WUD4 166 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-220ENST00000461409 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 NECAB3Q96P71 396 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-220ENST00000461409 C1QTNF1Q9BXJ1 281 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 ANO3Q9BYT9 981 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 AGO4Q9HCK5 861 aaKnown RBP9.9□□□□□ -0.82
HDAC9-220ENST00000461409 NAP1L2Q9ULW6 460 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-220ENST00000461409 RWDD3Q9Y3V2 267 aa9.9□□□□□ -0.82
HDAC9-220ENST00000461409 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms