RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 KRT79Q5XKE5 535 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 HAUS3Q68CZ6 603 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 POTEBQ6S5H4 581 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 SESTD1Q86VW0 696 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 CATSPER3Q86XQ3 398 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 TPH2Q8IWU9 490 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 CKAP2LQ8IYA6 745 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 C7orf31Q8N865 590 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 SNX29Q8TEQ0 813 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
CHRD-209ENST00000461120 FAM167AQ96KS9 214 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 MMTAG2Q9BU76 263 aaKnown RBP15.44■□□□□ 0.06
CHRD-209ENST00000461120 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
CHRD-209ENST00000461120 CSRNP2Q9H175 543 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 ZSWIM4Q9H7M6 989 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 TUFT1Q9NNX1 390 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 HDAC6Q9UBN7 1215 aa15.44■□□□□ 0.06
CHRD-209ENST00000461120 TCHHQ07283 1943 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 HBP1O60381 514 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 CUTAO60888 179 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 STBD1O95210 358 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 LYPLA2O95372 231 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 OATP04181 439 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 PTPN11Q06124 597 aaPredicted RBP15.43■□□□□ 0.06
CHRD-209ENST00000461120 XKR3Q5GH77 459 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 FAM47CQ5HY64 1035 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 AXDND1Q5T1B0 1012 aaPredicted RBP15.43■□□□□ 0.06
CHRD-209ENST00000461120 C4orf19Q8IY42 314 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 BBXQ8WY36 941 aaPredicted RBP15.43■□□□□ 0.06
CHRD-209ENST00000461120 NRBP2Q9NSY0 501 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 GTF2IRD1Q9UHL9 959 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 TRPC6Q9Y210 931 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 LTBP2Q14767 1821 aa15.43■□□□□ 0.06
CHRD-209ENST00000461120 DDX11L8A8MPP1 907 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 INSRRP14616 1297 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 MUTP22033 750 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 HOXC8P31273 242 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 UBA7P41226 1012 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 ME1P48163 572 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 RTP1P59025 263 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 FOXK2Q01167 660 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 PPFIA1Q13136 1202 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 HIC1Q14526 733 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 GRIN2CQ14957 1233 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 SPECC1Q5M775 1068 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 USP49Q70CQ1 688 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
CHRD-209ENST00000461120 CABP7Q86V35 215 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 GDPD2Q9HCC8 539 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 SETD4Q9NVD3 440 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 PCDHA7Q9UN72 937 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 NRCAMQ92823 1304 aa15.42■□□□□ 0.06
CHRD-209ENST00000461120 C17orf102A2RUQ5 167 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 TMEM150BA6NC51 233 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 SLC26A4O43511 780 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 GRIK4Q16099 956 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 ECM1Q16610 540 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 AAK1Q2M2I8 961 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 ZNF484Q5JVG2 852 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 HYIQ5T013 277 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 GDF6Q6KF10 455 aaPredicted RBP15.41■□□□□ 0.06
CHRD-209ENST00000461120 POTEGQ6S5H5 508 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 ANO5Q75V66 913 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 ANKRD33Q7Z3H0 272 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
CHRD-209ENST00000461120 LMBR1Q8WVP7 490 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 EPSTI1Q96J88 318 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 TOX2Q96NM4 488 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 PNMA5Q96PV4 448 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 NIFKQ9BYG3 293 aaKnown RBP15.41■□□□□ 0.06
CHRD-209ENST00000461120 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 SEPT9Q9UHD8 586 aaPredicted RBP15.41■□□□□ 0.06
CHRD-209ENST00000461120 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 MROH7Q68CQ1 1323 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 KDM3AQ9Y4C1 1321 aa15.41■□□□□ 0.06
CHRD-209ENST00000461120 COL1A2P08123 1366 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 RRN3P2A6NIE6 340 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 ZBTB42B2RXF5 422 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 ZBTB39O15060 712 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 PQBP1O60828 265 aaKnown RBP15.4■□□□□ 0.06
CHRD-209ENST00000461120 GPR37L1O60883 481 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 GNAT1P11488 350 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 XRCC6P12956 609 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHRD-209ENST00000461120 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
CHRD-209ENST00000461120 IGBP1P78318 339 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 ADAM17P78536 824 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 ZNF200P98182 395 aaPredicted RBP15.4■□□□□ 0.06
CHRD-209ENST00000461120 TLE2Q04725 743 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 GRB10Q13322 594 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 TMEM119Q4V9L6 283 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 SHC4Q6S5L8 630 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 FAM126BQ8IXS8 530 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 TRAPPC12Q8WVT3 735 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 NACC1Q96RE7 527 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 TRPV6Q9H1D0 765 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 EPHX3Q9H6B9 360 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 ANKEF1Q9NU02 776 aa15.4■□□□□ 0.06
CHRD-209ENST00000461120 TRMT13Q9NUP7 481 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms