RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 OTOP2Q7RTS6 562 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 RSPH3Q86UC2 560 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 HSCBQ8IWL3 235 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 C4orf19Q8IY42 314 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 LRCH3Q96II8 777 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 HSD17B14Q9BPX1 270 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 MTIF3Q9H2K0 278 aaKnown RBP15.91■□□□□ 0.14
HDAC4-205ENST00000454542 PCDHA12Q9UN75 941 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 COL4A6Q14031 1691 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 LOXHD1Q8IVV2 1947 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 IGKV6-21A0A0C4DH24 114 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 MAGEB2O15479 319 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 MARCH6O60337 910 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 DKC1O60832 514 aaKnown RBP eCLIP15.9■□□□□ 0.14
HDAC4-205ENST00000454542 ACTN1P12814 892 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 TXKP42681 527 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
HDAC4-205ENST00000454542 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 FAM109BQ6ICB4 259 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-205ENST00000454542 BRAPQ7Z569 592 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 KIAA0319LQ8IZA0 1049 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 DYDC2Q96IM9 177 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 EIF2AK1Q9BQI3 630 aaKnown RBP15.9■□□□□ 0.14
HDAC4-205ENST00000454542 NRBP2Q9NSY0 501 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 SEPT9Q9UHD8 586 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-205ENST00000454542 PPME1Q9Y570 386 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 TRPV2Q9Y5S1 764 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 CDY2AQ9Y6F7 541 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 SQORQ9Y6N5 450 aa15.9■□□□□ 0.14
HDAC4-205ENST00000454542 TMEM150BA6NC51 233 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 LAD1O00515 517 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 SLITRK3O94933 977 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 SYT1P21579 422 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 PRPHP41219 470 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 ATP2C1P98194 919 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-205ENST00000454542 FBXO47Q5MNV8 452 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 NME8Q8N427 588 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 FAM49AQ9H0Q0 323 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-205ENST00000454542 ZSWIM4Q9H7M6 989 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 RGL1Q9NZL6 768 aa15.89■□□□□ 0.13
HDAC4-205ENST00000454542 RBAK-RBAKDNI3L0D1 243 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 EFCAB14O75071 495 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 WDR5P61964 334 aaKnown RBP15.88■□□□□ 0.13
HDAC4-205ENST00000454542 RESTQ13127 1097 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 PTGDRQ13258 359 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 LPIN1Q14693 890 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 PLA2G4FQ68DD2 849 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 DBF4BQ8NFT6 615 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 APBB2Q92870 758 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 SLC9A7Q96T83 725 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 FTOQ9C0B1 505 aaKnown RBP eCLIP15.88■□□□□ 0.13
HDAC4-205ENST00000454542 MTMR6Q9Y217 621 aa15.88■□□□□ 0.13
HDAC4-205ENST00000454542 TMEM265A0A087WTH1 108 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 ABHD14A-ACY1A0A1B0GW23 586 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 MAFO75444 373 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 SPATA31C1P0DKV0 1188 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 GHRP10912 638 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 YWHABP31946 246 aaKnown RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 CLCN3P51790 818 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 CYP4A11Q02928 519 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 TBC1D8BQ0IIM8 1120 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 MTERF2Q49AM1 385 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 IER5Q5VY09 327 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 PHOSPHO2Q8TCD6 241 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 POLR3CQ9BUI4 534 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 CELF4Q9BZC1 486 aaKnown RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 DHX33Q9H6R0 707 aaKnown RBP15.87■□□□□ 0.13
HDAC4-205ENST00000454542 TUFT1Q9NNX1 390 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 CYP26B1Q9NR63 512 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 SLC4A7Q9Y6M7 1214 aa15.87■□□□□ 0.13
HDAC4-205ENST00000454542 GPR32O75388 356 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 MED24O75448 989 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 TMEM62Q0P6H9 643 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 CTTNQ14247 550 aaKnown RBP15.86■□□□□ 0.13
HDAC4-205ENST00000454542 IL17AQ16552 155 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 TMEM266Q2M3C6 531 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 EFCAB12Q6NXP0 572 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
HDAC4-205ENST00000454542 ZNF710Q8N1W2 664 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 LRRC71Q8N4P6 559 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 USP38Q8NB14 1042 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 SEPT8Q92599 483 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 PBX4Q9BYU1 374 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
HDAC4-205ENST00000454542 AGO3Q9H9G7 860 aaKnown RBP15.86■□□□□ 0.13
HDAC4-205ENST00000454542 CDH23Q9H251 3354 aa15.86■□□□□ 0.13
HDAC4-205ENST00000454542 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 ZBBXA8MT70 800 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 M0QZ92 97 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 STX6O43752 255 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
HDAC4-205ENST00000454542 MUTP22033 750 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 DNAJB2P25686 324 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 RPA1P27694 616 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms