RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 CYFIP1Q7L576 1253 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 RSPH3Q86UC2 560 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 KBTBD3Q8NAB2 608 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 GPR152Q8TDT2 470 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 AUTS2Q8WXX7 1259 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 SECISBP2LQ93073 1101 aaKnown RBP10.63□□□□□ -0.71
RPE-210ENST00000438204 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 ARHGEF3Q9NR81 526 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 ZMIZ1Q9ULJ6 1067 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 SIT1Q9Y3P8 196 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 PCDHB7Q9Y5E2 793 aa10.63□□□□□ -0.71
RPE-210ENST00000438204 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 C1QTNF9BB2RNN3 333 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 PROS1P07225 676 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 C1QTNF9P0C862 333 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 HOXA13P31271 388 aaPredicted RBP10.62□□□□□ -0.71
RPE-210ENST00000438204 IGBP1P78318 339 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 LPAL2Q16609 132 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 QRICH1Q2TAL8 776 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
RPE-210ENST00000438204 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 KCNV1Q6PIU1 500 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 OTOP3Q7RTS5 596 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 MCF2L2Q86YR7 1114 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 FTSJ3Q8IY81 847 aaKnown RBP10.62□□□□□ -0.71
RPE-210ENST00000438204 PJA1Q8NG27 643 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 EPC1Q9H2F5 836 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 DZANK1Q9NVP4 752 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 PUF60Q9UHX1 559 aaKnown RBP10.62□□□□□ -0.71
RPE-210ENST00000438204 TRPV2Q9Y5S1 764 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 EVPLQ92817 2033 aa10.62□□□□□ -0.71
RPE-210ENST00000438204 IGSF9BQ9UPX0 1349 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 MBLAC1A4D2B0 266 aaPredicted RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 NCLP19338 710 aaKnown RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 HSD17B4P51659 736 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 CSTF1Q05048 431 aaKnown RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 MARCH8Q5T0T0 291 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 N4BP2L1Q5TBK1 243 aaPredicted RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 METTL7BQ6UX53 244 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 LRRC55Q6ZSA7 311 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 MRPL43Q8N983 215 aaKnown RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 ST13P5Q8NFI4 369 aaPredicted RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 TOMM22Q9NS69 142 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 SPATA6Q9NWH7 488 aaPredicted RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 IGSF9Q9P2J2 1179 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 GMEB2Q9UKD1 530 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 DOCK6Q96HP0 2047 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 MAST4O15021 2626 aa10.61□□□□□ -0.71
RPE-210ENST00000438204 ASH1LQ9NR48 2969 aaKnown RBP10.61□□□□□ -0.71
RPE-210ENST00000438204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.6□□□□□ -0.71
RPE-210ENST00000438204 ORC4O43929 436 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 GDF9O60383 454 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 SRFP11831 508 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 CCND2P30279 289 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
RPE-210ENST00000438204 ZNF528Q3MIS6 628 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 PHLDB3Q6NSJ2 640 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 TSSK4Q6SA08 328 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 VSIG10LQ86VR7 867 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 ADGRF4Q8IZF3 695 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 ATRIPQ8WXE1 791 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 ZNF558Q96NG5 402 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 ADAM2Q99965 735 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 RNF19AQ9NV58 838 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 MRPL11Q9Y3B7 192 aaKnown RBP10.6□□□□□ -0.71
RPE-210ENST00000438204 PCDHGA2Q9Y5H1 932 aa10.6□□□□□ -0.71
RPE-210ENST00000438204 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
RPE-210ENST00000438204 WDFY3Q8IZQ1 3526 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 LAMTOR5O43504 91 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 SMARCA5O60264 1052 aaPredicted RBP10.59□□□□□ -0.71
RPE-210ENST00000438204 LILRB5O75023 590 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 TGFB3P10600 412 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 GBP2P32456 591 aaPredicted RBP10.59□□□□□ -0.71
RPE-210ENST00000438204 PPM1AP35813 382 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 SHC2P98077 582 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 CABP7Q86V35 215 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 SLC44A3Q8N4M1 653 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 ZBTB44Q8NCP5 570 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 SLC22A17Q8WUG5 538 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 TRAPPC12Q8WVT3 735 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
RPE-210ENST00000438204 DENND3A2RUS2 1198 aa10.58□□□□□ -0.72
RPE-210ENST00000438204 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
RPE-210ENST00000438204 C9IYK1 514 aa10.58□□□□□ -0.72
RPE-210ENST00000438204 NT5C1B-RDH14C9J2C7 533 aa10.58□□□□□ -0.72
RPE-210ENST00000438204 M0QZ92 97 aa10.58□□□□□ -0.72
RPE-210ENST00000438204 DHX16O60231 1041 aaKnown RBP10.58□□□□□ -0.72
RPE-210ENST00000438204 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
RPE-210ENST00000438204 METAP2P50579 478 aaKnown RBP eCLIP10.58□□□□□ -0.72
RPE-210ENST00000438204 KRT17Q04695 432 aa10.58□□□□□ -0.72
RPE-210ENST00000438204 PTPN14Q15678 1187 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms