RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 RBM18Q96H35 190 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SCLYQ96I15 445 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 C16orf45Q96MC5 204 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PIGSQ96S52 555 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PPP1R9BQ96SB3 815 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SPSB2Q99619 263 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TRIM5Q9C035 493 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SIL1Q9H173 461 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 GHITMQ9H3K2 345 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 ANTXR1Q9H6X2 564 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 VTA1Q9NP79 307 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 FANCFQ9NPI8 374 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 C11orf16Q9NQ32 467 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SEC31BQ9NQW1 1179 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PAPOLBQ9NRJ5 636 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 TMEM39AQ9NV64 488 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 GGA3Q9NZ52 723 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CGNQ9P2M7 1197 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 CFAP45Q9UL16 551 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 COG5Q9UP83 839 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA9Q9Y5G4 932 aaKnown RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA8Q9Y5G5 932 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA7Q9Y5G6 932 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA6Q9Y5G7 932 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA3Q9Y5H0 932 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PCDHGA2Q9Y5H1 932 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 SNX13Q9Y5W8 968 aa3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 EPN1Q9Y6I3 576 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 RSF1Q96T23 1441 aaPredicted RBP3.49□□□□□ -1.85
CTDSPL-203ENST00000416688 PASKQ96RG2 1323 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 GOLGA6L3A6NEY3 463 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 GOLGA8AA7E2F4 631 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 GOLGA8BA8MQT2 603 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CBX4O00257 560 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TNFRSF10CO14798 259 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 KPNA5O15131 536 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NEMFO60524 1076 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NOL3O60936 208 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CLASP2O75122 1294 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 XYLBO75191 536 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PAGE1O75459 146 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PALMO75781 387 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 BBOX1O75936 387 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 FGF18O76093 207 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TMEM63AO94886 807 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 UBXN7O94888 489 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 RTN3O95197 1032 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 GOSR1O95249 250 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 SGPL1O95470 568 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 APBB3O95704 486 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CHGBP05060 677 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ITGAVP06756 1048 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PSAPP07602 524 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 LAG3P18627 525 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ITPKAP23677 461 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 MAPK3P27361 379 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 HOXC12P31275 282 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 STIP1P31948 543 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 INPP5BP32019 993 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ACTN2P35609 894 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 HADHAP40939 763 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NOP2P46087 812 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 POLD2P49005 469 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CTCFP49711 727 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 MCM2P49736 904 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 SCAND1P57086 179 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NLRP12P59046 1061 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 GPR85P60893 370 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TFCP2Q12800 502 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 BFSP1Q12934 665 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 SNAPC2Q13487 334 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PRPF4BQ13523 1007 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 EFR3AQ14156 821 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 MYBPC3Q14896 1274 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 POSTNQ15063 836 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TAF5Q15542 800 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 SKOR2Q2VWA4 1001 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ZACNQ401N2 412 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ANO6Q4KMQ2 910 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 DNTTIP2Q5QJE6 756 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PTCRAQ6ISU1 281 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NAA16Q6N069 864 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 LLGL2Q6P1M3 1020 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 POMZP3Q6PJE2 187 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 LMBR1LQ6UX01 489 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 KIAA1211Q6ZU35 1233 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 FAM47EQ6ZV65 393 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 PRPF39Q86UA1 669 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 VWA5B2Q8N398 1253 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NAT8LQ8N9F0 302 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 CLRN3Q8NCR9 226 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 FAM13CQ8NE31 585 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 OR52K2Q8NGK3 314 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 TDRD7Q8NHU6 1098 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 KIAA1524Q8TCG1 905 aa3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 NANOS1Q8WY41 292 aaKnown RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF75CPQ92670 426 aaPredicted RBP3.48□□□□□ -1.85
CTDSPL-203ENST00000416688 MVB12AQ96EY5 273 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms