RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 POU3F3P20264 500 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-209ENST00000415920 ME1P48163 572 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 DEFB103AP81534 67 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 PTPN11Q06124 597 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-209ENST00000415920 GRB10Q13322 594 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 SLC39A14Q15043 492 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
CPNE1-209ENST00000415920 MIER3Q7Z3K6 550 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 LEO1Q8WVC0 666 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-209ENST00000415920 WNT8BQ93098 351 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 SPATA33Q96N06 139 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 GBP4Q96PP9 640 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-209ENST00000415920 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-209ENST00000415920 PCDHA12Q9UN75 941 aa15.29■□□□□ 0.04
CPNE1-209ENST00000415920 WDR64B1ANS9 1081 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 DHX15O43143 795 aaKnown RBP15.28■□□□□ 0.04
CPNE1-209ENST00000415920 KPNA6O60684 536 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 CCNE2O96020 404 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPNE1-209ENST00000415920 JAK3P52333 1124 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 GRIN1Q05586 938 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 BRDTQ58F21 947 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-209ENST00000415920 ZNF746Q6NUN9 644 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-209ENST00000415920 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
CPNE1-209ENST00000415920 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 NOD1Q9Y239 953 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
CPNE1-209ENST00000415920 NBNO60934 754 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 PPP6R2O75170 966 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 ACTR2P61160 394 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 WDR5P61964 334 aaKnown RBP15.27■□□□□ 0.04
CPNE1-209ENST00000415920 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 BFSP2Q13515 415 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 HIC1Q14526 733 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 IL17AQ16552 155 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 CSPP1Q1MSJ5 1256 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 TRAF7Q6Q0C0 670 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 GDPD5Q8WTR4 605 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 CLIC6Q96NY7 704 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
CPNE1-209ENST00000415920 HDAC6Q9UBN7 1215 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.04
CPNE1-209ENST00000415920 EVPLQ92817 2033 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 PP2D1A8MPX8 630 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 EML1O00423 815 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 BACH1O14867 736 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 TLL1O43897 1013 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 SFNP31947 248 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 TCF7P36402 384 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 ZNF200P98182 395 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 CYP4A11Q02928 519 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 HAUS3Q68CZ6 603 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 SESTD1Q86VW0 696 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 SMAP1Q8IYB5 467 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 ERMNQ8TAM6 284 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 KHSRPQ92945 711 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 EMID1Q96A84 441 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 GPR20Q99678 358 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 CSRNP2Q9H175 543 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 EPHX3Q9H6B9 360 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 DISC1Q9NRI5 854 aa15.26■□□□□ 0.03
CPNE1-209ENST00000415920 SRPRBQ9Y5M8 271 aaKnown RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 MORC2Q9Y6X9 1032 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-209ENST00000415920 BRWD1Q9NSI6 2320 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 CUTAO60888 179 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 BAIAP3O94812 1187 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 PSAPP07602 524 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 CKBP12277 381 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 SELPP16109 830 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 LONP1P36776 959 aaKnown RBP15.25■□□□□ 0.03
CPNE1-209ENST00000415920 TXLNAP40222 546 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
CPNE1-209ENST00000415920 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 MIS18BP1Q6P0N0 1132 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 IGSF22Q8N9C0 903 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 CAGE1Q8TC20 777 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 AFAP1L1Q8TED9 768 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 GTF2IRD1Q9UHL9 959 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 RCOR1Q9UKL0 485 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 MTUS1Q9ULD2 1270 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 PCDHA7Q9UN72 937 aa15.25■□□□□ 0.03
CPNE1-209ENST00000415920 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
CPNE1-209ENST00000415920 IGSF9BQ9UPX0 1349 aa15.24■□□□□ 0.03
CPNE1-209ENST00000415920 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms