RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 HFE2Q6ZVN8 426 aa8.88□□□□□ -0.99
LSM5-202ENST00000409292 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
LSM5-202ENST00000409292 EFHBQ8N7U6 833 aa8.88□□□□□ -0.99
LSM5-202ENST00000409292 PIBF1Q8WXW3 757 aa8.88□□□□□ -0.99
LSM5-202ENST00000409292 PUF60Q9UHX1 559 aaKnown RBP8.88□□□□□ -0.99
LSM5-202ENST00000409292 PLAGL2Q9UPG8 496 aa8.88□□□□□ -0.99
LSM5-202ENST00000409292 CDY2AQ9Y6F7 541 aa8.88□□□□□ -0.99
LSM5-202ENST00000409292 TMEM221A6NGB7 291 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 M0R296 226 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
LSM5-202ENST00000409292 PPP1R11O60927 126 aaPredicted RBP8.87□□□□□ -0.99
LSM5-202ENST00000409292 CHRNA1P02708 482 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 MARK3P27448 753 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 SMARCA1P28370 1054 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 IGBP1P78318 339 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 MRPS9P82933 396 aaKnown RBP8.87□□□□□ -0.99
LSM5-202ENST00000409292 ADAM15Q13444 863 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 MTMR1Q13613 665 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 LPIN1Q14693 890 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 SEC23AQ15436 765 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 FBXO47Q5MNV8 452 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 CASC1Q6TDU7 716 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 NFXL1Q6ZNB6 911 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 TMTC2Q8N394 836 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 NME8Q8N427 588 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 DNAJB3Q8WWF6 145 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
LSM5-202ENST00000409292 CDCA3Q99618 268 aaPredicted RBP8.87□□□□□ -0.99
LSM5-202ENST00000409292 SDF4Q9BRK5 362 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 FAM49AQ9H0Q0 323 aaPredicted RBP8.87□□□□□ -0.99
LSM5-202ENST00000409292 TLE6Q9H808 572 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 ALG13Q9NP73 1137 aaKnown RBP8.87□□□□□ -0.99
LSM5-202ENST00000409292 TCEAL9Q9UHQ7 104 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 PCDHB7Q9Y5E2 793 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 TRPV2Q9Y5S1 764 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 CHD7Q9P2D1 2997 aa8.87□□□□□ -0.99
LSM5-202ENST00000409292 FRMPD4Q14CM0 1322 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 CCDC69A6NI79 296 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 DDX11L8A8MPP1 907 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 PIK3CDO00329 1044 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 DDAH1O94760 285 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 EYA4O95677 639 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 CALM1P0DP23 149 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 CALM2P0DP24 149 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 CALM3P0DP25 149 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 SCG2P13521 617 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 LTBRP36941 435 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 NRIP1P48552 1158 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 SLC26A2P50443 739 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 ADAM17P78536 824 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 SIGLEC14Q08ET2 396 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 NFX1Q12986 1120 aaKnown RBP8.86□□□□□ -0.99
LSM5-202ENST00000409292 COASYQ13057 564 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 SMC5Q8IY18 1101 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 FBXL6Q8N531 539 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 TMEM87AQ8NBN3 555 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 POF1BQ8WVV4 589 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 ZNF689Q96CS4 500 aaPredicted RBP8.86□□□□□ -0.99
LSM5-202ENST00000409292 NEK1Q96PY6 1258 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 MAP3K14Q99558 947 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 PHF7Q9BWX1 381 aaPredicted RBP8.86□□□□□ -0.99
LSM5-202ENST00000409292 PSTPIP2Q9H939 334 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 JPH1Q9HDC5 661 aaPredicted RBP8.86□□□□□ -0.99
LSM5-202ENST00000409292 C1orf112Q9NSG2 853 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 MRPL42Q9Y6G3 142 aaKnown RBP8.86□□□□□ -0.99
LSM5-202ENST00000409292 MYO7AQ13402 2215 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 LAMA4Q16363 1823 aa8.86□□□□□ -0.99
LSM5-202ENST00000409292 NLRC5Q86WI3 1866 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 DENND3A2RUS2 1198 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 MBLAC1A4D2B0 266 aaPredicted RBP8.85□□□□□ -0.99
LSM5-202ENST00000409292 HOXA2O43364 376 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 PPFIA3O75145 1194 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 TBX10O75333 385 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 ATF7P17544 494 aaPredicted RBP8.85□□□□□ -0.99
LSM5-202ENST00000409292 IBSPP21815 317 aaPredicted RBP8.85□□□□□ -0.99
LSM5-202ENST00000409292 CD52P31358 61 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 ZXDAP98168 799 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 KRT76Q01546 638 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 NUCB1Q02818 461 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 DLX2Q07687 328 aaPredicted RBP8.85□□□□□ -0.99
LSM5-202ENST00000409292 MGAT3Q09327 533 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 PAN2Q504Q3 1202 aaKnown RBP8.85□□□□□ -0.99
LSM5-202ENST00000409292 FAM160B1Q5W0V3 765 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 USP17L6PQ6QN14 398 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 RUFY4Q6ZNE9 571 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 CYB5R4Q7L1T6 521 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 RBM23Q86U06 439 aaKnown RBP8.85□□□□□ -0.99
LSM5-202ENST00000409292 TEX2Q8IWB9 1127 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 SCUBE3Q8IX30 993 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 THNSL1Q8IYQ7 743 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 ABI1Q8IZP0 508 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 SMRP1Q8NCR6 262 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 RPGRIP1Q96KN7 1286 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 MTA3Q9BTC8 594 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 SPZ1Q9BXG8 430 aa8.85□□□□□ -0.99
LSM5-202ENST00000409292 CELF4Q9BZC1 486 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms