RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 MRPS17Q9Y2R5 130 aaKnown RBP9.85□□□□□ -0.83
RPE-203ENST00000408981 COL12A1Q99715 3063 aa9.85□□□□□ -0.83
RPE-203ENST00000408981 CLUHO75153 1309 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 PTPRQQ9UMZ3 2332 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 LCTP09848 1927 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.84□□□□□ -0.83
RPE-203ENST00000408981 ANHXE9PGG2 379 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 SMIM10L2AP0DMW4 78 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 SMIM10L2BP0DMW5 78 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 LAMP2P13473 410 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 CALML3P27482 149 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 PDE4AP27815 886 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 PPM1AP35813 382 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 CXCL12P48061 93 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 CSRP3P50461 194 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 PFKPQ01813 784 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 SATB1Q01826 763 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 IKQ13123 557 aaPredicted RBP9.84□□□□□ -0.83
RPE-203ENST00000408981 FZD5Q13467 585 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 UAP1L1Q3KQV9 507 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 C4orf17Q53FE4 359 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 ZNF852Q6ZMS4 543 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 MAMSTRQ6ZN01 415 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 SEPT14Q6ZU15 432 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 SLC22A17Q8WUG5 538 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 ARID3AQ99856 593 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 CHRDQ9H2X0 955 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 WDR6Q9NNW5 1121 aaKnown RBP9.84□□□□□ -0.83
RPE-203ENST00000408981 ANKMY1Q9P2S6 941 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 NXF1Q9UBU9 619 aaKnown RBP9.84□□□□□ -0.83
RPE-203ENST00000408981 PCDHB7Q9Y5E2 793 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 PCDHGA5Q9Y5G8 931 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 SDK1Q7Z5N4 2213 aa9.84□□□□□ -0.83
RPE-203ENST00000408981 URB1O60287 2271 aaKnown RBP9.83□□□□□ -0.84
RPE-203ENST00000408981 CDK8P49336 464 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 SNAP25P60880 206 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 WDR43Q15061 677 aaKnown RBP eCLIP9.83□□□□□ -0.84
RPE-203ENST00000408981 TSHZ1Q6ZSZ6 1077 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 PPTC7Q8NI37 304 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 WHAMMQ8TF30 809 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 IER2Q9BTL4 223 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 RPP25Q9BUL9 199 aaKnown RBP9.83□□□□□ -0.84
RPE-203ENST00000408981 FTHL17Q9BXU8 183 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 RNPEPQ9H4A4 650 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 CWH43Q9H720 699 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 TMEM9BQ9NQ34 198 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 PIH1D3Q9NQM4 214 aaKnown RBP9.83□□□□□ -0.84
RPE-203ENST00000408981 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
RPE-203ENST00000408981 CCPG1Q9ULG6 757 aa9.83□□□□□ -0.84
RPE-203ENST00000408981 NDRG2Q9UN36 371 aaKnown RBP9.83□□□□□ -0.84
RPE-203ENST00000408981 A0A087WV48 116 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 B4DLN1 442 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 TMEM232C9JQI7 657 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 SLC28A2O43868 658 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 IGSF3O75054 1194 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 MAFO75444 373 aaPredicted RBP9.82□□□□□ -0.84
RPE-203ENST00000408981 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
RPE-203ENST00000408981 GNAT1P11488 350 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 EDNRBP24530 442 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 CD52P31358 61 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 PBX3P40426 434 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 RAP1GAPP47736 663 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 MRPL12P52815 198 aaKnown RBP9.82□□□□□ -0.84
RPE-203ENST00000408981 ATP8B2P98198 1209 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 KCNT2Q6UVM3 1135 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 SLC30A10Q6XR72 485 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 CACNA2D4Q7Z3S7 1137 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 AUTS2Q8WXX7 1259 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 ZNF558Q96NG5 402 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 CRNKL1Q9BZJ0 848 aaKnown RBP9.82□□□□□ -0.84
RPE-203ENST00000408981 SPG21Q9NZD8 308 aa9.82□□□□□ -0.84
RPE-203ENST00000408981 B8ZZF3 427 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 APAF1O14727 1248 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 HOXC8P31273 242 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 STAT2P52630 851 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 LAMC2Q13753 1193 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 FBXO47Q5MNV8 452 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 TTC39AQ5SRH9 613 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 FAM102BQ5T8I3 360 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 GET4Q7L5D6 327 aaPredicted RBP9.81□□□□□ -0.84
RPE-203ENST00000408981 RAB44Q7Z6P3 723 aaPredicted RBP9.81□□□□□ -0.84
RPE-203ENST00000408981 KBTBD6Q86V97 674 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 PPFIBP1Q86W92 1011 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 RPAP2Q8IXW5 612 aaPredicted RBP9.81□□□□□ -0.84
RPE-203ENST00000408981 DCBLD2Q96PD2 775 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 AGO3Q9H9G7 860 aaKnown RBP9.81□□□□□ -0.84
RPE-203ENST00000408981 SETD4Q9NVD3 440 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.81□□□□□ -0.84
RPE-203ENST00000408981 DOPEY2Q9Y3R5 2298 aa9.81□□□□□ -0.84
RPE-203ENST00000408981 RELNP78509 3460 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 MYH8P13535 1937 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 LNP1A1A4G5 178 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 NFIBO00712 420 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 PPFIA4O75335 1185 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 VAMP4O75379 141 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 BMP3P12645 472 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 MGAT3Q09327 533 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 PARM1Q6UWI2 310 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 SCUBE3Q8IX30 993 aa9.8□□□□□ -0.84
RPE-203ENST00000408981 SDR42E1Q8WUS8 393 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms