RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TBCKQ8TEA7 893 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TRERF1Q96PN7 1200 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 TUBB2BQ9BVA1 445 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 AMNQ9BXJ7 453 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
SMARCB1-203ENST00000407082 PLXNA1Q9UIW2 1896 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 PVALEFA0A1B0GWK0 134 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 MARCH6O60337 910 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 PPP1R11O60927 126 aaPredicted RBP14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 CSF2RAP15509 400 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 STX17P56962 302 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 TUBB4BP68371 445 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 PSMD2Q13200 908 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 PPP4R3AQ6IN85 833 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 MFSD5Q6N075 450 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 C16orf59Q7L2K0 433 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 ANKRD33Q7Z3H0 272 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 TMTC1Q8IUR5 882 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 ADSSL1Q8N142 457 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 CHST13Q8NET6 341 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 ANKRD7Q92527 254 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 MMP19Q99542 508 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 BLZF1Q9H2G9 400 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 TMEM60Q9H2L4 133 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 SLC28A3Q9HAS3 691 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 HCN4Q9Y3Q4 1203 aa14.32□□□□□ -0.12
SMARCB1-203ENST00000407082 USP27XA6NNY8 438 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 KCNJ18B7U540 433 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 CCDC175P0C221 793 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 AKR1A1P14550 325 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 COPB1P53618 953 aaKnown RBP14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 TFF2Q03403 129 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 KCNJ12Q14500 433 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 RAB30Q15771 203 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 KCNA10Q16322 511 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 KMT5BQ4FZB7 885 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 TCP11X2Q5H9J9 407 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 KRT79Q5XKE5 535 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 ABRAQ8N0Z2 381 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 TMEM199Q8N511 208 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 TC2NQ8N9U0 490 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 GIMAP8Q8ND71 665 aaPredicted RBP14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 TINF2Q9BSI4 451 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 RNF146Q9NTX7 359 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 INTS13Q9NVM9 706 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 FBXO40Q9UH90 709 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 PPP2R2CQ9Y2T4 447 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 MRPL11Q9Y3B7 192 aaKnown RBP14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 ABCB11O95342 1321 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 KDM3AQ9Y4C1 1321 aa14.31□□□□□ -0.12
SMARCB1-203ENST00000407082 A0A1W2PQC6 194 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 BMP1P13497 986 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 CCNE1P24864 410 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 PBX1P40424 430 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 PRCPP42785 496 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 KCTD2Q14681 263 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 JAKMIP3Q5VZ66 844 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 FOXR2Q6PJQ5 311 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 MOXD1Q6UVY6 613 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 RETREG2Q8NC44 543 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 NT5C3AQ9H0P0 336 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 BMP2KQ9NSY1 1161 aaPredicted RBP14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 MUC3AQ02505 3323 aa14.3□□□□□ -0.12
SMARCB1-203ENST00000407082 KIF20AO95235 890 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 PLCG1P19174 1290 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 CASQ1P31415 396 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 TECP42680 631 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 DNM2P50570 870 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 USP11P51784 963 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 KCNQ1P51787 676 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 ASIC1P78348 528 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 KRT31Q15323 416 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 AAK1Q2M2I8 961 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 CYP26C1Q6V0L0 522 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 SYT10Q6XYQ8 523 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 APTXQ7Z2E3 356 aaKnown RBP14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 STAMQ92783 540 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 GLT1D1Q96MS3 346 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 MTMR9Q96QG7 549 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 LRFN3Q9BTN0 628 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 EPHX3Q9H6B9 360 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 CXXC1Q9P0U4 656 aaPredicted RBP14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
SMARCB1-203ENST00000407082 NFIBO00712 420 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms