RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 PCDHA6Q9UN73 950 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 PCDHA8Q9Y5H6 950 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 UBIAD1Q9Y5Z9 338 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 ATG2AQ2TAZ0 1938 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 NRCAMQ92823 1304 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 TTC3P53804 2025 aa11.24□□□□□ -0.61
NIFKP1-201ENST00000398317 RALGAPA2Q2PPJ7 1873 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 EVPLQ92817 2033 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 SLC19A1P41440 591 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 IGBP1P78318 339 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 MTMR1Q13613 665 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 GRIK4Q16099 956 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 TMEM192Q8IY95 271 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 DNAJB3Q8WWF6 145 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 APBB2Q92870 758 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 GLG1Q92896 1179 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 ZBTB10Q96DT7 871 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 CDHR1Q96JP9 859 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 PGBD1Q96JS3 809 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 TCEANC2Q96MN5 208 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
NIFKP1-201ENST00000398317 SPTLC1O15269 473 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 KCNA5P22460 613 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 MGAT3Q09327 533 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 GPM6BQ13491 265 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 LPIN1Q14693 890 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 MARCH8Q5T0T0 291 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 RETREG3Q86VR2 466 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 CYP2W1Q8TAV3 490 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 MRPL38Q96DV4 380 aaKnown RBP11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 SAMD11Q96NU1 681 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 PCYT2Q99447 389 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 SMARCAD1Q9H4L7 1026 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 ERAP1Q9NZ08 941 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 TUBE1Q9UJT0 475 aa11.22□□□□□ -0.61
NIFKP1-201ENST00000398317 CNTNAP5Q8WYK1 1306 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 H3BNC9 293 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 PTPROQ16827 1216 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 LEXMQ3ZCV2 418 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 RPAINQ86UA6 219 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 RSPH3Q86UC2 560 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 IL17RAQ96F46 866 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 MXRA8Q9BRK3 442 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 C1QTNF1Q9BXJ1 281 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 FAM49AQ9H0Q0 323 aaPredicted RBP11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 JPH1Q9HDC5 661 aaPredicted RBP11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 SLC9A2Q9UBY0 812 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 CDY2AQ9Y6F7 541 aa11.21□□□□□ -0.61
NIFKP1-201ENST00000398317 MYH9P35579 1960 aaKnown RBP11.21□□□□□ -0.62
NIFKP1-201ENST00000398317 TRIOO75962 3097 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 MBLAC1A4D2B0 266 aaPredicted RBP11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 ENPP3O14638 875 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 DXOO77932 396 aaKnown RBP11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 ARP10275 920 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 INSRRP14616 1297 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 IL9P15248 144 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 CTNNB1P35222 781 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 MMP16P51512 607 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 NAPAP54920 295 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 TMEM62Q0P6H9 643 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 RTN1Q16799 776 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 FBXO47Q5MNV8 452 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 EP400NLQ6ZTU2 488 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 FIBCD1Q8N539 461 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 TRAPPC12Q8WVT3 735 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 LRFN3Q9BTN0 628 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 AGO3Q9H9G7 860 aaKnown RBP11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 KCNH7Q9NS40 1196 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
NIFKP1-201ENST00000398317 KIAA1671Q9BY89 1806 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 FAM86C2PA6NEL3 165 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 MAFGO15525 162 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 ZBTB43O43298 467 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 CSPG5O95196 566 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 JUNDP17535 347 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 CD52P31358 61 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 ADCY7P51828 1080 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 ACTR2P61160 394 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 MRPS6P82932 125 aaKnown RBP11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 EXOSC10Q01780 885 aaKnown RBP11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 ITGB3BPQ13352 177 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms