RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TRIM59Q8IWR1 403 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 LRRC34Q8IZ02 419 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 SCFD2Q8WU76 684 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 PRCCQ92733 491 aaPredicted RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 FMO2Q99518 471 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 ERVK-5Q9HDB9 667 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 STK17AQ9UEE5 414 aa15.59■□□□□ 0.09
CLIP2-203ENST00000395060 DBR1Q9UK59 544 aaKnown RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
CLIP2-203ENST00000395060 RBAK-RBAKDNI3L0D1 243 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 SNAP25P60880 206 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 CUL1Q13616 776 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 IRF2BP2Q7Z5L9 587 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
CLIP2-203ENST00000395060 TATDN2Q93075 761 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 RAB34Q9BZG1 259 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 RIC8AQ9NPQ8 531 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 CACNA1SQ13698 1873 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 DOCK2Q92608 1830 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 PEX19P40855 299 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 PSMC6P62333 389 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 SBK1Q52WX2 424 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 TPTE2Q6XPS3 522 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 IQCDQ96DY2 449 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 CHMP6Q96FZ7 201 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 XPO6Q96QU8 1125 aaKnown RBP15.58■□□□□ 0.08
CLIP2-203ENST00000395060 GANQ9H2C0 597 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.08
CLIP2-203ENST00000395060 RSPH10B2B2RC85 870 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 CETN3O15182 167 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 RSPH10BP0C881 870 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 DRD4P21917 467 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ZKSCAN8Q15776 578 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-203ENST00000395060 GALNT17Q6IS24 598 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 RDH13Q8NBN7 331 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 NOD2Q9HC29 1040 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ABCF3Q9NUQ8 709 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 TOM1O60784 492 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 TRIM37O94972 964 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 H2AFZP0C0S5 128 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ARHGAP44Q17R89 818 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ZCWPW2Q504Y3 356 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 KCTD1Q719H9 257 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 H2AFVQ71UI9 128 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 CCDC197Q8NCU1 140 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 EPS8L3Q8TE67 593 aaKnown RBP15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ARMCX3Q9UH62 379 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-203ENST00000395060 TMEM59LQ9UK28 342 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLIP2-203ENST00000395060 A8MUI8 341 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 LRRN2O75325 713 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 MYBP10242 640 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 RFC4P35249 363 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 SLC29A2Q14542 456 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 TRMT1LQ7Z2T5 733 aaKnown RBP15.57■□□□□ 0.08
CLIP2-203ENST00000395060 FBXO25Q8TCJ0 367 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 MIEF2Q96C03 454 aa15.57■□□□□ 0.08
CLIP2-203ENST00000395060 ACTR5Q9H9F9 607 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-203ENST00000395060 GALCP54803 685 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 ELF3P78545 371 aaPredicted RBP15.56■□□□□ 0.08
CLIP2-203ENST00000395060 CCDC65Q8IXS2 484 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 TEX11Q8IYF3 940 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 LRRC57Q8N9N7 239 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 CCDC63Q8NA47 563 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 CCDC26Q8TAB7 109 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 DYDC1Q8WWB3 177 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 HAS1Q92839 578 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 GCNT4Q9P109 453 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 IGSF9BQ9UPX0 1349 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 BTDP43251 543 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 BIRC3Q13489 604 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 PLS1Q14651 629 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 NFIXQ14938 502 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 LRIG3Q6UXM1 1119 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 ANKRD42Q8N9B4 389 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 CCT6BQ92526 530 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 C18orf8Q96DM3 657 aa15.56■□□□□ 0.08
CLIP2-203ENST00000395060 PLCH1Q4KWH8 1693 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 MYBL1P10243 752 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 PON1P27169 355 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 KCNJ2P63252 427 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 PBKQ96KB5 322 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 SEMA4AQ9H3S1 761 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 INTS9Q9NV88 658 aaKnown RBP15.55■□□□□ 0.08
CLIP2-203ENST00000395060 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 MPHOSPH10O00566 681 aaKnown RBP15.55■□□□□ 0.08
CLIP2-203ENST00000395060 DDX3XO00571 662 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLIP2-203ENST00000395060 RGS16O15492 202 aaPredicted RBP15.55■□□□□ 0.08
CLIP2-203ENST00000395060 RPS6KA4O75676 772 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 FLOT1O75955 427 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 AKAP3O75969 853 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 ATP6V1G2O95670 118 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 XRCC5P13010 732 aaKnown RBP15.55■□□□□ 0.08
CLIP2-203ENST00000395060 PLCG2P16885 1265 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 SFR1Q86XK3 245 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 NSMCE1Q8WV22 266 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms