RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 MDM1Q8TC05 714 aa15.17■□□□□ 0.02
SNCAIP-203ENST00000379538 NUP58Q9BVL2 599 aa15.17■□□□□ 0.02
SNCAIP-203ENST00000379538 A1CFQ9NQ94 594 aaKnown RBP15.17■□□□□ 0.02
SNCAIP-203ENST00000379538 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
SNCAIP-203ENST00000379538 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
SNCAIP-203ENST00000379538 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 PAK2Q13177 524 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 BYSLQ13895 437 aaKnown RBP15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 UAP1Q16222 522 aaPredicted RBP15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 USH1GQ495M9 461 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 SIK3Q9Y2K2 1263 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 MYH4Q9Y623 1939 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 NEBLO76041 1014 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 PRLRP16471 622 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 CCNE1P24864 410 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 KLRC1P26715 233 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 HSD17B3P37058 310 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 ITIH3Q06033 890 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 SNCBQ16143 134 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 ODF2Q5BJF6 829 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 GPC2Q8N158 579 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 AP1M1Q9BXS5 423 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 KBTBD4Q9NVX7 518 aa15.16■□□□□ 0.02
SNCAIP-203ENST00000379538 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 RPS12P25398 132 aaKnown RBP15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 LONP1P36776 959 aaKnown RBP15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 CAP2P40123 477 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 LRRC41Q15345 812 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 UBE2SQ16763 222 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 FAM83BQ5T0W9 1011 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 YTHDF3Q7Z739 585 aaKnown RBP15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 ERGIC2Q96RQ1 377 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 HERC5Q9UII4 1024 aaKnown RBP15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 GMNCA6NCL1 334 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 SMCO2A6NFE2 343 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 ANKRD20A8PQ5CZ79 823 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 DYMQ7RTS9 669 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 FAM83AQ86UY5 434 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 FAXDC2Q96IV6 333 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 SEC16BQ96JE7 1060 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 NOX5Q96PH1 765 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 TMBIM4Q9HC24 238 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 BARHL2Q9NY43 387 aa15.15■□□□□ 0.02
SNCAIP-203ENST00000379538 WLSQ5T9L3 541 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 MOB2Q70IA6 237 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 BAP1Q92560 729 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 ZNF341Q9BYN7 854 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 TRIM9Q9C026 710 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 RIOX1Q9H6W3 641 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 SEC63Q9UGP8 760 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 NOVA2Q9UNW9 492 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 ATXN2Q99700 1313 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 CLGNO14967 610 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 TLR2O60603 784 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 ECHS1P30084 290 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 SCTRP47872 440 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 CLNS1AP54105 237 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 KCNB1Q14721 858 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 BLIDQ8IZY5 108 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 GJA10Q969M2 543 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 SPZ1Q9BXG8 430 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
SNCAIP-203ENST00000379538 SBF1O95248 1867 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L15C9J2P7 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L13C9JLJ4 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L11C9JVI0 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L18D6R9N7 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L22D6RA61 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L17D6RBQ6 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L19D6RCP7 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L20D6RJB6 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 KIF1CO43896 1103 aaKnown RBP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 GNAQP50148 359 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 ZNF844Q08AG5 666 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L24Q0WX57 530 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 CDC37Q16543 378 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 NAIF1Q69YI7 327 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 USP17L6PQ6QN14 398 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 UBLCP1Q8WVY7 318 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 RAPGEF5Q92565 580 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 DHTKD1Q96HY7 919 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 SLC12A6Q9UHW9 1150 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 CTNNA1P35221 906 aaKnown RBP15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 CDK17Q00537 523 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 CACNA2D4Q7Z3S7 1137 aa15.13■□□□□ 0.01
SNCAIP-203ENST00000379538 SPATS2Q86XZ4 545 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms