RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 SAPCD2Q86UD0 394 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 ZNF354CQ86Y25 554 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 NKAPQ8N5F7 415 aaKnown RBP7.13□□□□□ -1.27
SSX3-202ENST00000376893 MFSD2AQ8NA29 543 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 ADCY4Q8NFM4 1077 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 ELOA3Q8NG57 546 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 SCLT1Q96NL6 688 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 FMNL2Q96PY5 1086 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 MYD88Q99836 296 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 MTA3Q9BTC8 594 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 VTA1Q9NP79 307 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 SPTLC3Q9NUV7 552 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 THG1LQ9NWX6 298 aaKnown RBP7.13□□□□□ -1.27
SSX3-202ENST00000376893 TSPYL4Q9UJ04 414 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 RNF112Q9ULX5 631 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 PDZRN3Q9UPQ7 1066 aa7.13□□□□□ -1.27
SSX3-202ENST00000376893 SF3B6Q9Y3B4 125 aaKnown RBP7.13□□□□□ -1.27
SSX3-202ENST00000376893 CARMIL3Q8ND23 1372 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 UTRNP46939 3433 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 KLHL33A6NCF5 533 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 HTATSF1O43719 755 aaKnown RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 ITIH2P19823 946 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 DDIT3P35638 169 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 IREB2P48200 963 aaKnown RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 CCT5P48643 541 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 ALDH5A1P51649 535 aaPredicted RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 PHC1P78364 1004 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 STK3Q13188 491 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 LRRC32Q14392 662 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 ODF1Q14990 250 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 NBPF9Q3BBW0 867 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 TMEM177Q53S58 311 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 EXOSC6Q5RKV6 272 aaKnown RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 FAM9BQ8IZU0 186 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 CRIPAKQ8N1N5 446 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 NLGN2Q8NFZ4 835 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 CHTF18Q8WVB6 975 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 BRF1Q92994 677 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 KLHDC7BQ96G42 594 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 KREMEN1Q96MU8 473 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 FAM193BQ96PV7 902 aaPredicted RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 TAAR9Q96RI9 348 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 PAGR1Q9BTK6 254 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 FOXQ1Q9C009 403 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 AAASQ9NRG9 546 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 DISC1Q9NRI5 854 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 C14orf119Q9NWQ9 140 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 KLF15Q9UIH9 416 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 CEP131Q9UPN4 1083 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 DMTF1Q9Y222 760 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 PCDHA8Q9Y5H6 950 aa7.12□□□□□ -1.27
SSX3-202ENST00000376893 COL11A2P13942 1736 aaPredicted RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 TNRC6CQ9HCJ0 1690 aaKnown RBP7.12□□□□□ -1.27
SSX3-202ENST00000376893 PXDNLA1KZ92 1463 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 WDR64B1ANS9 1081 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PRRT4C9JH25 899 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 GPR25O00155 361 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 GSTA4O15217 222 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 RPS6KA4O75676 772 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 A1BGP04217 495 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 MMP10P09238 476 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 FAM163BP0C2L3 166 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 ECI1P42126 302 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 EIF4A1P60842 406 aaKnown RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 DDR1Q08345 913 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PAK1Q13153 545 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PROSER3Q2NL68 480 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 E4F1Q66K89 784 aaPredicted RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 DENND5AQ6IQ26 1287 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 C1orf228Q6PIY5 440 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 Q6ZNB5 142 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 OTOP1Q7RTM1 612 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 ZC3H7AQ8IWR0 971 aaKnown RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 DNAJB8Q8NHS0 232 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 COPS5Q92905 334 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 DPH2Q9BQC3 489 aaPredicted RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 NAA15Q9BXJ9 866 aaKnown RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 USP26Q9BXU7 913 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 INO80BQ9C086 356 aaPredicted RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 RNF38Q9H0F5 515 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PNNQ9H307 717 aaKnown RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 FAM204AQ9H8W3 233 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 RAD18Q9NS91 495 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 FAM50BQ9Y247 325 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 IPPQ9Y573 584 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA9Q9Y5G4 932 aaKnown RBP7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA8Q9Y5G5 932 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA7Q9Y5G6 932 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA3Q9Y5H0 932 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 PCDHGA2Q9Y5H1 932 aa7.11□□□□□ -1.27
SSX3-202ENST00000376893 FAM187AA6NFU0 413 aa7.1□□□□□ -1.27
SSX3-202ENST00000376893 PIP5K1CO60331 668 aa7.1□□□□□ -1.27
SSX3-202ENST00000376893 CTNND1O60716 968 aaKnown RBP7.1□□□□□ -1.27
SSX3-202ENST00000376893 OFD1O75665 1012 aa7.1□□□□□ -1.27
SSX3-202ENST00000376893 LRIG2O94898 1065 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms