RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PDE4DQ08499 809 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 KCTD19Q17RG1 926 aaPredicted RBP14.11□□□□□ -0.15
MSH5-204ENST00000375755 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
MSH5-204ENST00000375755 DDX42Q86XP3 938 aaKnown RBP eCLIP14.11□□□□□ -0.152e-6■□□□□ 8.3
MSH5-204ENST00000375755 DAGLBQ8NCG7 672 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 TBCKQ8TEA7 893 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 CSRNP1Q96S65 589 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 NT5C2P49902 561 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 VWA3BQ502W6 1294 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 ODF2Q5BJF6 829 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 HPS3Q969F9 1004 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 MRIQ9BWK5 157 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 ISCUQ9H1K1 167 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 NDST4Q9H3R1 872 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 BAIAP2L1Q9UHR4 511 aa14.11□□□□□ -0.15
MSH5-204ENST00000375755 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 GH2P01242 217 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 PAEPP09466 180 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 DRD4P21917 467 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 CTNNA1P35221 906 aaKnown RBP14.1□□□□□ -0.15
MSH5-204ENST00000375755 BIRC2Q13490 618 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 PROCA1Q8NCQ7 364 aaPredicted RBP14.1□□□□□ -0.15
MSH5-204ENST00000375755 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 STAMBPL1Q96FJ0 436 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 NEUROG2Q9H2A3 272 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 NOVA2Q9UNW9 492 aaKnown RBP14.1□□□□□ -0.15
MSH5-204ENST00000375755 UBA7P41226 1012 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 EHHADHQ08426 723 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 BIRC3Q13489 604 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 ASPRV1Q53RT3 343 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 GKAP1Q5VSY0 366 aaPredicted RBP14.1□□□□□ -0.15
MSH5-204ENST00000375755 HGSNATQ68CP4 663 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 HIBCHQ6NVY1 386 aaPredicted RBP14.1□□□□□ -0.15
MSH5-204ENST00000375755 TATDN1Q6P1N9 297 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 DTHD1Q6ZMT9 781 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 EGFL6Q8IUX8 553 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 SEMA6BQ9H3T3 888 aa14.1□□□□□ -0.15
MSH5-204ENST00000375755 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 SPDYE2BA6NHP3 402 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 EGFRP00533 1210 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 MYL1P05976 194 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 SPDYE6P0CI01 402 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 C11orf91Q3C1V1 193 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 PDXDC1Q6P996 788 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 CPLX4Q7Z7G2 160 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 CCDC84Q86UT8 332 aaPredicted RBP14.09□□□□□ -0.15
MSH5-204ENST00000375755 MAB21L3Q8N8X9 362 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 USP38Q8NB14 1042 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 KDM4CQ9H3R0 1056 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 LRRC4CQ9HCJ2 640 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 C6orf50Q9HD87 102 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 PSME4Q14997 1843 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 GHRP10912 638 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 FLT3P36888 993 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 ECE1P42892 770 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 SLC8A3P57103 927 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 TNNC1P63316 161 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 GRIK3Q13003 919 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 PPP1R7Q15435 360 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 KIAA1755Q5JYT7 1200 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 MEI1Q5TIA1 1274 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 SUPT20HQ8NEM7 779 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 CUL5Q93034 780 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 GMLQ99445 158 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 TMEM39BQ9GZU3 492 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 DHX36Q9H2U1 1008 aaKnown RBP14.09□□□□□ -0.15
MSH5-204ENST00000375755 TDP2O95551 362 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 KLRC1P26715 233 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 MAGOHP61326 146 aaKnown RBP14.09□□□□□ -0.15
MSH5-204ENST00000375755 ICA1Q05084 483 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 ABCB5Q2M3G0 1257 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 NBPF9Q3BBW0 867 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 TDRD12Q587J7 1177 aaKnown RBP14.09□□□□□ -0.15
MSH5-204ENST00000375755 NSMCE1Q8WV22 266 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 MAGOHBQ96A72 148 aaKnown RBP14.09□□□□□ -0.15
MSH5-204ENST00000375755 TRIM9Q9C026 710 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.09□□□□□ -0.15
MSH5-204ENST00000375755 TMEM59LQ9UK28 342 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
MSH5-204ENST00000375755 KIF3CO14782 793 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 SLC37A4O43826 429 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 VIL1P09327 827 aaKnown RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 ASIC1P78348 528 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 IRX1P78414 480 aaPredicted RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 MYO1EQ12965 1108 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 NONOQ15233 471 aaKnown RBP eCLIP14.08□□□□□ -0.16
MSH5-204ENST00000375755 AGBL2Q5U5Z8 902 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 SLFN13Q68D06 897 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 TAX1BP1Q86VP1 789 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 RTKN2Q8IZC4 609 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 REXO1Q8N1G1 1221 aaKnown RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 P3H4Q92791 437 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 HOOK2Q96ED9 719 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 THOC1Q96FV9 657 aaKnown RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 RSRC1Q96IZ7 334 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms