RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
HMGCL-203ENST00000374490 FKBP1CQ5VVH2 108 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 AENQ8WTP8 325 aaKnown RBP15.29■□□□□ 0.04
HMGCL-203ENST00000374490 FAM151AQ8WW52 585 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 LENG9Q96B70 501 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 SELENOOQ9BVL4 669 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 FGFBP2Q9BYJ0 223 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 ZHX3Q9H4I2 956 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
HMGCL-203ENST00000374490 HERC5Q9UII4 1024 aaKnown RBP15.29■□□□□ 0.04
HMGCL-203ENST00000374490 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 UBE4BO95155 1302 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
HMGCL-203ENST00000374490 CES2O00748 559 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 TLR2O60603 784 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 IVLP07476 585 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 SPATA31C1P0DKV0 1188 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 ACTN2P35609 894 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 NAP1L1P55209 391 aaKnown RBP15.28■□□□□ 0.04
HMGCL-203ENST00000374490 NNTQ13423 1086 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 NFIL3Q16649 462 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 KLHDC7AQ5VTJ3 777 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 EMBQ6PCB8 327 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 SFR1Q86XK3 245 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 ZC3H15Q8WU90 426 aaKnown RBP15.28■□□□□ 0.04
HMGCL-203ENST00000374490 DRC1Q96MC2 740 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 DAAM1Q9Y4D1 1078 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 GTPBP10A4D1E9 387 aaKnown RBP15.28■□□□□ 0.04
HMGCL-203ENST00000374490 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.04
HMGCL-203ENST00000374490 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
HMGCL-203ENST00000374490 MAP2K2P36507 400 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 ZNF76P36508 570 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 EPHB4P54760 987 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.043e-6■■■□□ 15.2
HMGCL-203ENST00000374490 AFAP1L1Q8TED9 768 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 TLR10Q9BXR5 811 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.28■□□□□ 0.04
HMGCL-203ENST00000374490 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 OLFML3Q9NRN5 406 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
HMGCL-203ENST00000374490 MSH4O15457 936 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 XRCC5P13010 732 aaKnown RBP15.27■□□□□ 0.03
HMGCL-203ENST00000374490 HNRNPH2P55795 449 aaKnown RBP15.27■□□□□ 0.03
HMGCL-203ENST00000374490 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.03
HMGCL-203ENST00000374490 ZSCAN26Q16670 478 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 STXBP4Q6ZWJ1 553 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 SAPCD2Q86UD0 394 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 FAM83AQ86UY5 434 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 VPS36Q86VN1 386 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 FMNL3Q8IVF7 1028 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 TBC1D5Q92609 795 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 ABHD8Q96I13 439 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.03
HMGCL-203ENST00000374490 STIM2Q9P246 746 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.03
HMGCL-203ENST00000374490 FAM86B1E9PN63 330 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 WNT10BO00744 389 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 PPP1R12BO60237 982 aaPredicted RBP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 RNF40O75150 1001 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 GFPT2O94808 682 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 GDF11O95390 407 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 FAM86B2P0C5J1 330 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 PRKCIP41743 596 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 ZNF280AP59817 542 aaPredicted RBP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 EXOC3L4Q17RC7 722 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 USH1GQ495M9 461 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 CAVIN3Q969G5 261 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 ZBED3Q96IU2 234 aaPredicted RBP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 SPAG5Q96R06 1193 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 EIF2AK1Q9BQI3 630 aaKnown RBP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 LRRC1Q9BTT6 524 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 ZNF408Q9H9D4 720 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 SEL1LQ9UBV2 794 aa15.26■□□□□ 0.03
HMGCL-203ENST00000374490 CNOT7Q9UIV1 285 aaKnown RBP15.26■□□□□ 0.03
HMGCL-203ENST00000374490 GOLGA6BA6NDN3 693 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 CA12O43570 354 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 OPA1O60313 960 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 GH2P01242 217 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 NR3C1P04150 777 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 CAPN2P17655 700 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 GYS2P54840 703 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 TNFAIP1Q13829 316 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 MEI1Q5TIA1 1274 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 ALS2CLQ60I27 953 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms