RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 VCX3BQ9H321 246 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 VCX3AQ9NNX9 186 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 LEMD3Q9Y2U8 911 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 C2CD2Q9Y426 696 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 RTN2O75298 545 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 SKOR1P84550 965 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 MAN2A1Q16706 1144 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 PRCCQ92733 491 aaPredicted RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 TRIM9Q9C026 710 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 KCNQ5Q9NR82 932 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 CCT8L1PA6NM43 557 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 TMEM110-MUSTN1A8MSY1 372 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 LDHCP07864 332 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 HNRNPCP07910 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 TMED1Q13445 227 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 NPY5RQ15761 445 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 SLC10A5Q5PT55 438 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 DPP8Q6V1X1 898 aaPredicted RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 FAM47EQ6ZV65 393 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 DNAAF5Q86Y56 855 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 PPFIBP2Q8ND30 876 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 NAF1Q96HR8 494 aaKnown RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 GJD4Q96KN9 370 aaPredicted RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 OSBPL7Q9BZF2 842 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 SH2D4AQ9H788 454 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 INTS9Q9NV88 658 aaKnown RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 CORO1CQ9ULV4 474 aaPredicted RBP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM9-203ENST00000360392 PCDHAC2Q9Y5I4 1007 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 AFF2P51816 1311 aa10.63□□□□□ -0.71
TRIM9-203ENST00000360392 KCTD1Q719H9 257 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 DAAM2Q86T65 1068 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 IRF2BP1Q8IU81 584 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 TRIM42Q8IWZ5 723 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 MYOCDQ8IZQ8 938 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 WHAMMQ8TF30 809 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 LARP4BQ92615 738 aaKnown RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 EPAS1Q99814 870 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 CICQ96RK0 1608 aaPredicted RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 LRRC10BA6NIK2 292 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 PPP2R2AP63151 447 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 GLE1Q53GS7 698 aaKnown RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 TTI2Q6NXR4 508 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 INTS8Q75QN2 995 aaKnown RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 GIMAP8Q8ND71 665 aaPredicted RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 MDM1Q8TC05 714 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 ARHGEF2Q92974 986 aaKnown RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 CHMP6Q96FZ7 201 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 QTRT2Q9H974 415 aaKnown RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 PANK4Q9NVE7 773 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 ARHGAP20Q9P2F6 1191 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 CNTNAP4Q9C0A0 1308 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 RASA1P20936 1047 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 CCND1P24385 295 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 KLC1Q07866 573 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 CWF19L1Q69YN2 538 aaKnown RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 PPP4R3AQ6IN85 833 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 CCDC25Q86WR0 208 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 DRAXINQ8NBI3 349 aaPredicted RBP10.62□□□□□ -0.71
TRIM9-203ENST00000360392 ECT2Q9H8V3 914 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 PCDHA6Q9UN73 950 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 PCDHA8Q9Y5H6 950 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 PCNTO95613 3336 aa10.62□□□□□ -0.71
TRIM9-203ENST00000360392 KRIT1O00522 736 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 RHOBTB3O94955 611 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 PYGBP11216 843 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ABCB4P21439 1286 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 RCAN1P53805 252 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 UBE2SQ16763 222 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ANKRD20A2Q5SQ80 823 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ANKRD20A1Q5TYW2 823 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ANKRD20A3Q5VUR7 823 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 PEX26Q7Z412 305 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 DDX42Q86XP3 938 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 LRP5O75197 1615 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ORC4O43929 436 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 MMEP08473 750 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 GYS1P13807 737 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 TAL1P17542 331 aaPredicted RBP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 GSTO1P78417 241 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 LLGL1Q15334 1064 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 SLC35G1Q2M3R5 365 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 SNRNP27Q8WVK2 155 aaKnown RBP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 P3H4Q92791 437 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 BICD1Q96G01 975 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 MAD2L2Q9UI95 211 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 SCAF8Q9UPN6 1271 aaKnown RBP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 DDX60Q8IY21 1712 aaKnown RBP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 PLCH1Q4KWH8 1693 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 CFAP73A6NFT4 308 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRIM9-203ENST00000360392 EPHB6O15197 1021 aa10.61□□□□□ -0.71
TRIM9-203ENST00000360392 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms