RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 MYBP10242 640 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 KLRC1P26715 233 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 CCNI2Q6ZMN8 369 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-201ENST00000358894 SPATA20Q8TB22 786 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 PRM3Q9NNZ6 103 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 ARHGAP20Q9P2F6 1191 aa13.3□□□□□ -0.28
COL20A1-201ENST00000358894 GCLMP48507 274 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 MXI1P50539 228 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 CENPPQ6IPU0 288 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
COL20A1-201ENST00000358894 PBKQ96KB5 322 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 IWS1Q96ST2 819 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 SPATS2LQ9NUQ6 558 aaKnown RBP13.29□□□□□ -0.28
COL20A1-201ENST00000358894 LRRC10BA6NIK2 292 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 GYS1P13807 737 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 ZNF211Q13398 564 aaPredicted RBP13.29□□□□□ -0.28
COL20A1-201ENST00000358894 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 ABCB11O95342 1321 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 NR1D1P20393 614 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 ZNF653Q96CK0 615 aa13.29□□□□□ -0.28
COL20A1-201ENST00000358894 LRRIQ3A6PVS8 624 aaPredicted RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 DESP17661 470 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 PDE6CP51160 858 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 PEX3P56589 373 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SLC20A2Q08357 652 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SH2D3CQ8N5H7 860 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 TNFRSF25Q93038 417 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 RGPD5Q99666 1765 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SSU72P8A0A1W2PR75 194 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 UCHL3P15374 230 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 CHRNA5P30532 468 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 APBA1Q02410 837 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 EZH2Q15910 746 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 C10orf76Q5T2E6 689 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SLC30A10Q6XR72 485 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 ANKRD42Q8N9B4 389 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 MED15Q96RN5 788 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 PLAAQ9Y263 795 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 TARSL2A2RTX5 802 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SLCO1A2P46721 670 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 IFNAR2P48551 515 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 KCNK18Q7Z418 384 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 DNAAF5Q86Y56 855 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 ZNF384Q8TF68 577 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 HNRNPLLQ8WVV9 542 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 A0A087X0T9 212 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 KIF1CO43896 1103 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 CLTAP09496 248 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 FAM228BP0C875 321 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 LIG4P49917 911 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 ZC2HC1CQ53FD0 456 aaPredicted RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 DCUN1D2Q6PH85 259 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 MCF2L2Q86YR7 1114 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 WHAMMQ8TF30 809 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 RIOX1Q9H6W3 641 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 C1orf112Q9NSG2 853 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 HPCAL4Q9UM19 191 aa13.28□□□□□ -0.28
COL20A1-201ENST00000358894 NOVA2Q9UNW9 492 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
COL20A1-201ENST00000358894 A0A1W2PQJ5 194 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 ADAMTS3O15072 1205 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 CYP11B2P19099 503 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 HOXA7P31268 230 aaPredicted RBP13.27□□□□□ -0.28
COL20A1-201ENST00000358894 SNX1Q13596 522 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 LIN9Q5TKA1 542 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 OTUD6AQ7L8S5 288 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 CATSPER3Q86XQ3 398 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 PNMA5Q96PV4 448 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 IKBKGQ9Y6K9 419 aa13.27□□□□□ -0.28
COL20A1-201ENST00000358894 RSPH10B2B2RC85 870 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 KLRC4O43908 158 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 MED24O75448 989 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 ZRANB2O95218 330 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL20A1-201ENST00000358894 RSPH10BP0C881 870 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 CD19P15391 556 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 PCK1P35558 622 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 PRELPP51888 382 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 PADI6Q6TGC4 694 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 NT5C1BQ96P26 610 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 DDX4Q9NQI0 724 aaKnown RBP13.27□□□□□ -0.29
COL20A1-201ENST00000358894 IPO5O00410 1097 aaKnown RBP13.27□□□□□ -0.29
COL20A1-201ENST00000358894 IFNB1P01574 187 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 ACTN3Q08043 901 aaPredicted RBP13.27□□□□□ -0.29
COL20A1-201ENST00000358894 RBBP5Q15291 538 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms