RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 HOXC9P31274 260 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 TMED10P49755 219 aaKnown RBP8.43□□□□□ -1.06
VANGL1-202ENST00000355485 PLEKHF1Q96S99 279 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 AP5M1Q9H0R1 490 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 DDIT3P35638 169 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 IQCB1Q15051 598 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 TPTE2Q6XPS3 522 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 C16orf62Q7Z3J2 963 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 RNF169Q8NCN4 708 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 TRIM55Q9BYV6 548 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 DBNLQ9UJU6 430 aaKnown RBP8.43□□□□□ -1.06
VANGL1-202ENST00000355485 ARHGAP26Q9UNA1 814 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 MAP3K19Q56UN5 1328 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 GSTA4O15217 222 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 NVLO15381 856 aaKnown RBP8.43□□□□□ -1.06
VANGL1-202ENST00000355485 MAFGO15525 162 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 ARFIP2P53365 341 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 TMPRSS15P98073 1019 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 ARHGAP4P98171 946 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 ITKQ08881 620 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 CRYMQ14894 314 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 SCG3Q8WXD2 468 aaKnown RBP8.43□□□□□ -1.06
VANGL1-202ENST00000355485 POMGNT1Q8WZA1 660 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 MCM8Q9UJA3 840 aa8.43□□□□□ -1.06
VANGL1-202ENST00000355485 TNKSO95271 1327 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 H0YIN7 160 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 K7ENM7 598 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 XPOTO43592 962 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 MAN1A2O60476 641 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ATP6V1G2O95670 118 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 LDHBP07195 334 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ADORA1P30542 326 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 TRIM50Q86XT4 487 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 MAPKAPK5Q8IW41 473 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ETAA1Q9NY74 926 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 TTC7AQ9ULT0 858 aaPredicted RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PRMT3O60678 531 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 GARSP41250 739 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PRPSAP1Q14558 356 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ADPGKQ9BRR6 497 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 FUT8Q9BYC5 575 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 TAF1DQ9H5J8 278 aaPredicted RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 UBE2TQ9NPD8 197 aaPredicted RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 KRT75O95678 551 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 A1BGP04217 495 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CYP2E1P05181 493 aaPredicted RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PGM1P36871 562 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 FAM26FQ5R3K3 315 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 RAD9BQ6WBX8 426 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CADPS2Q86UW7 1296 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 SULF1Q8IWU6 871 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 GALNT4Q8N4A0 578 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CARD9Q9H257 536 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 KIF28PB7ZC32 967 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ATXN8OSP0DMR3 200 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CPA2P48052 419 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CYP4A11Q02928 519 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ISLR2Q6UXK2 745 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 SESTD1Q86VW0 696 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 METTL23Q86XA0 190 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 TGFBRAP1Q8WUH2 860 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 RNPEPQ9H4A4 650 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 AMACRQ9UHK6 382 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PRCPP42785 496 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PAPOLAP51003 745 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 KDSRQ06136 332 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 GCKRQ14397 625 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 AGR3Q8TD06 166 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CNBD2Q96M20 576 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PUS3Q9BZE2 481 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 MMP1P03956 469 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 HOXD10P28358 340 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 MRPS15P82914 257 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CCDC15Q0P6D6 951 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 SLC9A5Q14940 896 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 NCAPHQ15003 741 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 STAMBPL1Q96FJ0 436 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 DRC3Q9H069 523 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 VCPKMTQ9H867 229 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 GOLGA8RI6L899 631 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 NECTIN1Q15223 517 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 SLC44A4Q53GD3 710 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 HABP4Q5JVS0 413 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 DCAF15Q66K64 600 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 PDXDC1Q6P996 788 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 KRT26Q7Z3Y9 468 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 RAB42Q8N4Z0 105 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 NMD3Q96D46 503 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 XPO6Q96QU8 1125 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 NPHS2Q9NP85 383 aa8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CPSF3Q9UKF6 684 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 THRAP3Q9Y2W1 955 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 SRPRBQ9Y5M8 271 aaKnown RBP8.42□□□□□ -1.06
VANGL1-202ENST00000355485 CCND1P24385 295 aa8.41□□□□□ -1.06
VANGL1-202ENST00000355485 PPP2R5EQ16537 467 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms