RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 MAGOHBQ96A72 148 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 RIC8AQ9NPQ8 531 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 TMEM59LQ9UK28 342 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 IGSF9BQ9UPX0 1349 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 MYH4Q9Y623 1939 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 AKAP3O75969 853 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 DPY19L2P1Q6NXN4 242 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 LRRC57Q8N9N7 239 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 SLC12A6Q9UHW9 1150 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 ATP8A1Q9Y2Q0 1164 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 GFPT2O94808 682 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 SHBGP04278 402 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 GPSM2P81274 684 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 CEP120Q8N960 986 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 CABS1Q96KC9 395 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 DDX4Q9NQI0 724 aaKnown RBP13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 HAUS2Q9NVX0 235 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
CCDC144CP-201ENST00000340196 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 UFL1O94874 794 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 FAM107AO95990 144 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 PON1P27169 355 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 DHX9Q08211 1270 aaKnown RBP13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 BYSLQ13895 437 aaKnown RBP13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 C15orf52Q6ZUT6 534 aaKnown RBP13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 PALB2Q86YC2 1186 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 MREGQ8N565 214 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 GLG1Q92896 1179 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 GOLGA6L10A6NI86 522 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 LRRN2O75325 713 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 FSBPO95073 299 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 ZBTB48P10074 688 aaPredicted RBP13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 SCP2P22307 547 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 USP11P51784 963 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 KRT71Q3SY84 523 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 RAPGEF5Q92565 580 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
CCDC144CP-201ENST00000340196 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 ZBTB39O15060 712 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 GLYCTKQ8IVS8 523 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 KIRREL3Q8IZU9 778 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 RUBCNQ92622 972 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 IQCDQ96DY2 449 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 SLC40A1Q9NP59 571 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PLCB1Q9NQ66 1216 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 GGT7Q9UJ14 662 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PNMA2Q9UL42 364 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 ABCB11O95342 1321 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 NAV1Q8NEY1 1877 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 TLDC2A0PJX2 215 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 BBOX1O75936 387 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 FGGP02679 453 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PPP4CP60510 307 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PDIA5Q14554 519 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 COG2Q14746 738 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 DCAF12L1Q5VU92 463 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 CYP2W1Q8TAV3 490 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 CD209Q9NNX6 404 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PPP1R9AQ9ULJ8 1098 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PGRMC1O00264 195 aaKnown RBP13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 SEMA3FQ13275 785 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 E2F5Q15329 346 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 EXOC3L4Q17RC7 722 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PRR16Q569H4 304 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 LRCH2Q5VUJ6 765 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 CD302Q8IX05 232 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 ZKSCAN4Q969J2 545 aaPredicted RBP13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 CCDC114Q96M63 670 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms