RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 KAZNQ674X7 775 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 CYFIP1Q7L576 1253 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 OSBPL9Q96SU4 736 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 PARVGQ9HBI0 331 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 UBE2TQ9NPD8 197 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 CHORDC1Q9UHD1 332 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SERPINA10Q9UK55 444 aa7.04□□□□□ -1.28
HMG20A-201ENST00000336216 SHANK3Q9BYB0 1731 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 DDTLA6NHG4 134 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 INO80B-WBP1J3KQ70 363 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 STXBP3O00186 592 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ASNSP08243 561 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 DESP17661 470 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 MDM2Q00987 491 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 COASYQ13057 564 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 RCSD1Q6JBY9 416 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 HIBCHQ6NVY1 386 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 TRAPPC11Q7Z392 1133 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ZBTB33Q86T24 672 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 MICAL1Q8TDZ2 1067 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ZIM3Q96PE6 472 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 APOL6Q9BWW8 343 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 JMJD4Q9H9V9 463 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 DNAJC17Q9NVM6 304 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 STK17AQ9UEE5 414 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 MAD2L2Q9UI95 211 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 NOVA2Q9UNW9 492 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CAPN6Q9Y6Q1 641 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 GLI3P10071 1580 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 AFDNP55196 1824 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 WNT7AO00755 349 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ACTN1P12814 892 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CD58P19256 250 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 KCNH2Q12809 1159 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 PPP2R5DQ14738 602 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 LMBRD2Q68DH5 695 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CACNA2D3Q8IZS8 1091 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CYP2W1Q8TAV3 490 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 RNPC3Q96LT9 517 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 RBM12Q9NTZ6 932 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 PIM2Q9P1W9 311 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 PLAAQ9Y263 795 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CD2APQ9Y5K6 639 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 KCPQ6ZWJ8 1503 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 GPR75-ASB3A0A0A6YYF3 556 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 IPO5O00410 1097 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 KIF4AO95239 1232 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 GCFC2P16383 781 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 PMS1P54277 932 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 HMGCS2P54868 508 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 HERVK_113P62684 666 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 SNX1Q13596 522 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ZC2HC1CQ53FD0 456 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 SEL1L2Q5TEA6 688 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ALKBH5Q6P6C2 394 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 UNC13DQ70J99 1090 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 ZNF354CQ86Y25 554 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CUEDC2Q9H467 287 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 SUFUQ9UMX1 484 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMG20A-201ENST00000336216 AGTPBP1Q9UPW5 1226 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 CEP83Q9Y592 693 aa7.03□□□□□ -1.28
HMG20A-201ENST00000336216 A0A1B0GUA9 196 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 RCCD1A6NED2 376 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SLC16A4O15374 487 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 AFPP02771 609 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 ATF7P17544 494 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 HDLBPQ00341 1268 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 DMP1Q13316 513 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 R3HDM1Q15032 1099 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SNCBQ16143 134 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 GNPTABQ3T906 1256 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SBK1Q52WX2 424 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 FAM133BQ5BKY9 247 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 WDR93Q6P2C0 686 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 TMED8Q6PL24 325 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 OTUD6AQ7L8S5 288 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SESTD1Q86VW0 696 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 CCDC26Q8TAB7 109 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SAAL1Q96ER3 474 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 MPHOSPH6Q99547 160 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 TRIM6Q9C030 488 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 DDX4Q9NQI0 724 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 LIMA1Q9UHB6 759 aaKnown RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 AMFRQ9UKV5 643 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 MTUS1Q9ULD2 1270 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 LRP6O75581 1613 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 MEFVO15553 781 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 CYTH3O43739 400 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SLCO1A2P46721 670 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 NEDD9Q14511 834 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 SHROOM1Q2M3G4 852 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-201ENST00000336216 BSPRYQ5W0U4 402 aa7.02□□□□□ -1.29
HMG20A-201ENST00000336216 DCAF15Q66K64 600 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms