RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 TCF3P15923 654 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 BRD2P25440 801 aaKnown RBP11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SHMT1P34896 483 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 STAT3P40763 770 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 EPHB4P54760 987 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 ARID5AQ03989 594 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SLC20A2Q08357 652 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 ENOX2Q16206 610 aaKnown RBP11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 HYIQ5T013 277 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 TRIM59Q8IWR1 403 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 TRPM4Q8TD43 1214 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SCFD1Q8WVM8 642 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 CUL5Q93034 780 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 EDEM3Q9BZQ6 932 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 TSPYL1Q9H0U9 437 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 PCDHA12Q9UN75 941 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 A0A087X0T9 212 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 ESYT3A0FGR9 886 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 PPFIA4O75335 1185 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SERPING1P05155 500 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 GLI1P08151 1106 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 PLA2G4BP0C869 781 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 FAM228BP0C875 321 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 CASP5P51878 434 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 RAPGEF1Q13905 1077 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SKIDA1Q1XH10 827 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SLC9C1Q4G0N8 1177 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 FOXR2Q6PJQ5 311 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 GPBP1Q86WP2 473 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 TBC1D5Q92609 795 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 RUBCNQ92622 972 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 SH3GL2Q99962 352 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 LRRC27Q9C0I9 530 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 GANQ9H2C0 597 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 KCTD10Q9H3F6 313 aa11.04□□□□□ -0.64
PRAMEF1-201ENST00000332296 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 ZBTB5O15062 677 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 MARCH6O60337 910 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 ENTPD3O75355 529 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 MED24O75448 989 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 CYP11B2P19099 503 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 PAFAH1B1P43034 410 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 FOXK1P85037 733 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 DNAAF5Q86Y56 855 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 ARL8AQ96BM9 186 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 RABEP2Q9H5N1 569 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 HACL1Q9UJ83 578 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 KDM3AQ9Y4C1 1321 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 POTEFA5A3E0 1075 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 GLTPD2A6NH11 291 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 ACTN1P12814 892 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 TNFRSF8P28908 595 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 CARSP49589 748 aaKnown RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 HIRAP54198 1017 aaPredicted RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 NAB2Q15742 525 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 SLC18A3Q16572 532 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 FAM153CQ494X1 144 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 HERC4Q5GLZ8 1057 aaPredicted RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 TTC19Q6DKK2 380 aaPredicted RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 RNF10Q8N5U6 811 aaKnown RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 CAVIN3Q969G5 261 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 P2RX7Q99572 595 aaKnown RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 TMEM39BQ9GZU3 492 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 FAM153AQ9UHL3 310 aa11.03□□□□□ -0.64
PRAMEF1-201ENST00000332296 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 VGLL3A8MV65 326 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 MPHOSPH10O00566 681 aaKnown RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 HEXIM1O94992 359 aaKnown RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 RNASE9P60153 205 aaKnown RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 SEPT2Q15019 361 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 DNAJC21Q5F1R6 531 aaKnown RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 ARSHQ5FYA8 562 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 EMBQ6PCB8 327 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 CCDC65Q8IXS2 484 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 FAM151AQ8WW52 585 aa11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 SYN2Q92777 582 aaPredicted RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
PRAMEF1-201ENST00000332296 ZIM3Q96PE6 472 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms