RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CDC42EP5Q6NZY7 148 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 NIM1KQ8IY84 436 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 PAF1Q8N7H5 531 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
VARS2-201ENST00000321897 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 ADAM33Q9BZ11 813 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 TBK1Q9UHD2 729 aa16.53■□□□□ 0.24
VARS2-201ENST00000321897 CAMTA1Q9Y6Y1 1673 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 MAP2K7O14733 419 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 RCAN1P53805 252 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 ZNF543Q08ER8 600 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 MUM1Q2TAK8 710 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 LMBRD2Q68DH5 695 aaPredicted RBP16.52■□□□□ 0.24
VARS2-201ENST00000321897 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 PLVAPQ9BX97 442 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.24
VARS2-201ENST00000321897 ZSCAN5CA6NGD5 496 aaPredicted RBP16.52■□□□□ 0.24
VARS2-201ENST00000321897 ERFP50548 548 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 MYL7Q01449 175 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 WDR44Q5JSH3 913 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 CYP2W1Q8TAV3 490 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 TEKT3Q9BXF9 490 aa16.52■□□□□ 0.24
VARS2-201ENST00000321897 RHOBTB3O94955 611 aa16.52■□□□□ 0.23
VARS2-201ENST00000321897 FGGP02679 453 aa16.52■□□□□ 0.23
VARS2-201ENST00000321897 ATF7P17544 494 aaPredicted RBP16.52■□□□□ 0.23
VARS2-201ENST00000321897 LRRC14Q15048 493 aa16.52■□□□□ 0.23
VARS2-201ENST00000321897 RBBP5Q15291 538 aaKnown RBP16.52■□□□□ 0.23
VARS2-201ENST00000321897 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.23
VARS2-201ENST00000321897 MTA3Q9BTC8 594 aa16.52■□□□□ 0.23
VARS2-201ENST00000321897 ECE2O60344 883 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 NR3C1P04150 777 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
VARS2-201ENST00000321897 SBK1Q52WX2 424 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 CCDC77Q9BR77 488 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 PARVGQ9HBI0 331 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 SLC40A1Q9NP59 571 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
VARS2-201ENST00000321897 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
VARS2-201ENST00000321897 UBR1Q8IWV7 1749 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 MYBP10242 640 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 NAIF1Q69YI7 327 aaPredicted RBP16.51■□□□□ 0.23
VARS2-201ENST00000321897 ZNF365Q70YC5 407 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 ACTR5Q9H9F9 607 aaPredicted RBP16.51■□□□□ 0.23
VARS2-201ENST00000321897 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 RAVER2Q9HCJ3 691 aaKnown RBP16.51■□□□□ 0.23
VARS2-201ENST00000321897 ANAPC4Q9UJX5 808 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 BCL9O00512 1426 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 SERPING1P05155 500 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 SRGNP10124 158 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 CDC25CP30307 473 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 IL17AQ16552 155 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 UBL4BQ8N7F7 174 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 PPFIBP2Q8ND30 876 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 STMN2Q93045 179 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 VIPAS39Q9H9C1 493 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 SNX12Q9UMY4 172 aa16.51■□□□□ 0.23
VARS2-201ENST00000321897 HMGB1P1B2RPK0 211 aaPredicted RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 NDUFB10O96000 172 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 GUF1Q8N442 669 aaKnown RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 SNX24Q9Y343 169 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 MMEP08473 750 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 PSMC2P35998 433 aaKnown RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 DCUN1D2Q6PH85 259 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 USP37Q86T82 979 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 GLG1Q92896 1179 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 ATP6V1G3Q96LB4 118 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 DNAJC12Q9UKB3 198 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 YY1AP1Q9H869 796 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 KLHL14Q9P2G3 628 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 MYBL2P10244 700 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 GBP1P32455 592 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 PRPHP41219 470 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 HP1BP3Q5SSJ5 553 aaPredicted RBP16.5■□□□□ 0.23
VARS2-201ENST00000321897 NUGGCQ68CJ6 796 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 ZNF449Q6P9G9 518 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 PACSIN1Q9BY11 444 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 SEMA6BQ9H3T3 888 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 AMACRQ9UHK6 382 aa16.5■□□□□ 0.23
VARS2-201ENST00000321897 KLRC1P26715 233 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms