RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 HMGCS2P54868 508 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 GNGT1P63211 74 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 ADCY2Q08462 1091 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 OSBPL9Q96SU4 736 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 MMTAG2Q9BU76 263 aaKnown RBP11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 PCDHA13Q9Y5I0 950 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 PJA2O43164 708 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 HSF2BPO75031 334 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 PTPRAP18433 802 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 VCAM1P19320 739 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 STAT3P40763 770 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 ARHGAP4P98171 946 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 APBA1Q02410 837 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 GPR162Q16538 588 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 FKBP15Q5T1M5 1219 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 EMC10Q5UCC4 262 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 DCAF15Q66K64 600 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 MOB2Q70IA6 237 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 SH3GL3Q99963 347 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 C7orf25Q9BPX7 421 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 RANBP17Q9H2T7 1088 aaKnown RBP11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 RAVER2Q9HCJ3 691 aaKnown RBP11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 STIM2Q9P246 746 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 FSBPO95073 299 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 KLK7P49862 253 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 MAGEC3Q8TD91 643 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 AK8Q96MA6 479 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 ALS2CR12Q96Q35 445 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 RNF14Q9UBS8 474 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 FEM1BQ9UK73 627 aa11.3□□□□□ -0.6
APOBEC3F-201ENST00000308521 ABCB11O95342 1321 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZEB2O60315 1214 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 SCP2P22307 547 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 GRIK3Q13003 919 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ECM1Q16610 540 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 HAUS3Q68CZ6 603 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 OTUD6BQ8N6M0 293 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 IFIH1Q9BYX4 1025 aaKnown RBP11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCPG1Q9ULG6 757 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PCDHA12Q9UN75 941 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 CAPN6Q9Y6Q1 641 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 NFIBO00712 420 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PEX10O60683 326 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ALAS1P13196 640 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PAFAH1B1P43034 410 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCDC50Q8IVM0 306 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 C1orf131Q8NDD1 294 aaKnown RBP11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 RUFY1Q96T51 708 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 PAGR1Q9BTK6 254 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ARHGAP20Q9P2F6 1191 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZNF536O15090 1300 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 DSG3P32926 999 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZNF76P36508 570 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 KIF11P52732 1056 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 BACE1P56817 501 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 AP1ARQ63HQ0 302 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 FAM160B2Q86V87 743 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 TSEN2Q8NCE0 465 aaKnown RBP11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 DCPSQ96C86 337 aaKnown RBP11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 TRIM9Q9C026 710 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 ETAA1Q9NY74 926 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 SIK3Q9Y2K2 1263 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 MOCS3O95396 460 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 PDE4DQ08499 809 aa11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms