RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PPP1R37O75864 691 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 ITGA4P13612 1032 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 LSP1P33241 339 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 GALCP54803 685 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 LACTBP83111 547 aaPredicted RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 TTLL12Q14166 644 aaPredicted RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 PWP2Q15269 919 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 SGO2Q562F6 1265 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 RCSD1Q6JBY9 416 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 IRF2BP1Q8IU81 584 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 TAF1DQ9H5J8 278 aaPredicted RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 AZI2Q9H6S1 392 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 PPEF1O14829 653 aaPredicted RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 EIF3HO15372 352 aaKnown RBP eCLIP14.41□□□□□ -0.16e-8■□□□□ 9.5
CASC4-201ENST00000299957 RPS6KA4O75676 772 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 SLC18A3Q16572 532 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 CTAGE3PQ8IX95 158 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 WHAMMQ8TF30 809 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 SPIRE2Q8WWL2 714 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 IQCDQ96DY2 449 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 C7orf25Q9BPX7 421 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 MTA3Q9BTC8 594 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 CCPG1Q9ULG6 757 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 SRCAPQ6ZRS2 3230 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 FTLP02792 175 aaPredicted RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 PSMC6P62333 389 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 NFIAQ12857 509 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 SYCP2LQ5T4T6 812 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 ZNF449Q6P9G9 518 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 CYP2W1Q8TAV3 490 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 NEK9Q8TD19 979 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 RSRC1Q96IZ7 334 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 ATP6V1G3Q96LB4 118 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 NAP1L4Q99733 375 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 IKZF4Q9H2S9 585 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 DBR1Q9UK59 544 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
CASC4-201ENST00000299957 DAGLAQ9Y4D2 1042 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 NEBLO76041 1014 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 GAS8O95995 478 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 HHATQ5VTY9 493 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 CASKIN2Q8WXE0 1202 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 KIFAP3Q92845 792 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 ODF2LQ9ULJ1 636 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 H0Y3Z8 333 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 GOLGA8SH3BPF8 625 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 GOLGA8MH3BSY2 632 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 RASGRF2O14827 1237 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 TAOK1Q7L7X3 1001 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 OSGEPQ9NPF4 335 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 ATP2A1O14983 1001 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 OSTNP61366 133 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
CASC4-201ENST00000299957 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 USP37Q86T82 979 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 KCNV2Q8TDN2 545 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 KLHL11Q9NVR0 708 aa14.4□□□□□ -0.1
CASC4-201ENST00000299957 ZBTB39O15060 712 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 CD58P19256 250 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 MXI1P50539 228 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 PSMD2Q13200 908 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 TMED2Q15363 201 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 SNCBQ16143 134 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 SH3RF1Q7Z6J0 888 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 KLHL29Q96CT2 875 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 PLCB1Q9NQ66 1216 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 LRRIQ4A6NIV6 560 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 LMNB1P20700 586 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
CASC4-201ENST00000299957 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.39□□□□□ -0.11
CASC4-201ENST00000299957 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 N4BP2L2Q92802 583 aaPredicted RBP14.39□□□□□ -0.11
CASC4-201ENST00000299957 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 HOMER3Q9NSC5 361 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 GMNCA6NCL1 334 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 SLC16A4O15374 487 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 EVI5O60447 810 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 MAPK4P31152 587 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 SYDE2Q5VT97 1194 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 PACS2Q86VP3 889 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 BTBD6Q96KE9 485 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 ANAPC4Q9UJX5 808 aa14.39□□□□□ -0.11
CASC4-201ENST00000299957 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
CASC4-201ENST00000299957 MAP2K7O14733 419 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 GCFC2P16383 781 aaKnown RBP14.38□□□□□ -0.11
CASC4-201ENST00000299957 KCNA1Q09470 495 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 PAF1Q8N7H5 531 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 TLR10Q9BXR5 811 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 GLT8D2Q9H1C3 349 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 CD248Q9HCU0 757 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 HAUS2Q9NVX0 235 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.38□□□□□ -0.11
CASC4-201ENST00000299957 AGLP35573 1532 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 TARSL2A2RTX5 802 aaKnown RBP14.38□□□□□ -0.11
CASC4-201ENST00000299957 A6NNZ2 444 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 HMGB1P1B2RPK0 211 aaPredicted RBP14.38□□□□□ -0.11
CASC4-201ENST00000299957 PDE6CP51160 858 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms