RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SBK1Q52WX2 424 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 PROM2Q8N271 834 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 GLG1Q92896 1179 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 EXOC3O60645 756 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 UCHL3P15374 230 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 SEL1L2Q5TEA6 688 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 PIGOQ8TEQ8 1089 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
SCAF4-201ENST00000286835 FRMD4BQ9Y2L6 1034 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
SCAF4-201ENST00000286835 FAM196BA6NMK8 535 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 USP17L10C9JJH3 530 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 DDX39AO00148 427 aaKnown RBP14.55□□□□□ -0.08
SCAF4-201ENST00000286835 PEX19P40855 299 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 UBXN2AP68543 259 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 SKOR1P84550 965 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 SUGP1Q8IWZ8 645 aaKnown RBP14.55□□□□□ -0.08
SCAF4-201ENST00000286835 AZI2Q9H6S1 392 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 A0A1W2PRG0 241 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 CLRN2A0PK11 232 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 MEI1Q5TIA1 1274 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 ISCUQ9H1K1 167 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 FAM114A2Q9NRY5 505 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 TBK1Q9UHD2 729 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 TCP10L2B9ZVM9 353 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 CACNB3P54284 484 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 CETN1Q12798 172 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 SNX1Q13596 522 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 PRR5LQ6MZQ0 368 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 ZNF746Q6NUN9 644 aaPredicted RBP14.54□□□□□ -0.08
SCAF4-201ENST00000286835 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 RAPGEF5Q92565 580 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 PURBQ96QR8 312 aaKnown RBP14.54□□□□□ -0.08
SCAF4-201ENST00000286835 NAP1L3Q99457 506 aaPredicted RBP14.54□□□□□ -0.08
SCAF4-201ENST00000286835 ACTR5Q9H9F9 607 aaPredicted RBP14.54□□□□□ -0.08
SCAF4-201ENST00000286835 BIRC3Q13489 604 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 ZNF571Q7Z3V5 609 aaPredicted RBP14.54□□□□□ -0.08
SCAF4-201ENST00000286835 GDAP1Q8TB36 358 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 NEK9Q8TD19 979 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 MICAL1Q8TDZ2 1067 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 SPZ1Q9BXG8 430 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 FGFBP2Q9BYJ0 223 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 TMBIM4Q9HC24 238 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 SLC24A3Q9HC58 644 aa14.54□□□□□ -0.08
SCAF4-201ENST00000286835 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
SCAF4-201ENST00000286835 ACSL3O95573 720 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 ADRA2BP18089 450 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 GRIK5Q16478 980 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 GDF3Q9NR23 364 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 BZW2Q9Y6E2 419 aaKnown RBP14.53□□□□□ -0.08
SCAF4-201ENST00000286835 CCDC169A6NNP5 214 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 TRIP13Q15645 432 aaPredicted RBP14.53□□□□□ -0.08
SCAF4-201ENST00000286835 SEPT7Q16181 437 aaKnown RBP14.53□□□□□ -0.08
SCAF4-201ENST00000286835 GEMIN8Q9NWZ8 242 aaKnown RBP14.53□□□□□ -0.08
SCAF4-201ENST00000286835 SPEF2Q9C093 1822 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 FLT1P17948 1338 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 TLR2O60603 784 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 FGFR4P22455 802 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 SLC27A3Q5K4L6 730 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 CAPN12Q6ZSI9 719 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 PHLDB2Q86SQ0 1253 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 CCDC50Q8IVM0 306 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 FAM186BQ8IYM0 893 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 OSGEPQ9NPF4 335 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 NAGPAQ9UK23 515 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 SCN11AQ9UI33 1791 aa14.53□□□□□ -0.08
SCAF4-201ENST00000286835 FLT3P36888 993 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 USP11P51784 963 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 GALCP54803 685 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 MYO1EQ12965 1108 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 UBL4BQ8N7F7 174 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 RUBCNQ92622 972 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CHMP6Q96FZ7 201 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CEP63Q96MT8 703 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 NID2Q14112 1375 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CCDC188H7C350 402 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 TRIM49P0CI25 452 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 TRIM49CP0CI26 452 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 AKR1B1P15121 316 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CHN1P15882 459 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 HOXA13P31271 388 aaPredicted RBP14.52□□□□□ -0.08
SCAF4-201ENST00000286835 ITIH3Q06033 890 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 ZNF844Q08AG5 666 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 PPP4R3AQ6IN85 833 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CYB5D1Q6P9G0 228 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 LRRC55Q6ZSA7 311 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 ADGRF4Q8IZF3 695 aa14.52□□□□□ -0.08
SCAF4-201ENST00000286835 CHRNA5P30532 468 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 KCNV1Q6PIU1 500 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 ZNF662Q6ZS27 426 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 EDEM3Q9BZQ6 932 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 PCIF1Q9H4Z3 704 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 VCPKMTQ9H867 229 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 CD209Q9NNX6 404 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 MTUS1Q9ULD2 1270 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 MYBP10242 640 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 NBPF9Q3BBW0 867 aa14.52□□□□□ -0.09
SCAF4-201ENST00000286835 RPAINQ86UA6 219 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms