RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RBAK-RBAKDNI3L0D1 243 aa14.16□□□□□ -0.14
CPSF6-201ENST00000266679 KLHL30Q0D2K2 578 aa14.16□□□□□ -0.14
CPSF6-201ENST00000266679 LRCH2Q5VUJ6 765 aa14.16□□□□□ -0.14
CPSF6-201ENST00000266679 RSBN1LQ6PCB5 846 aaPredicted RBP14.16□□□□□ -0.14
CPSF6-201ENST00000266679 VEZTQ9HBM0 779 aa14.16□□□□□ -0.14
CPSF6-201ENST00000266679 VPS18Q9P253 973 aa14.16□□□□□ -0.14
CPSF6-201ENST00000266679 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
CPSF6-201ENST00000266679 SFI1A8K8P3 1242 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-201ENST00000266679 CLIC2O15247 247 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 AFPP02771 609 aaKnown RBP14.15□□□□□ -0.14
CPSF6-201ENST00000266679 NR3C1P04150 777 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 SLC9A1P19634 815 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■■■■□ 23.1
CPSF6-201ENST00000266679 DLGAP5Q15398 846 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 MAP9Q49MG5 647 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 FRMD5Q7Z6J6 570 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 TPH2Q8IWU9 490 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 CDAN1Q8IWY9 1227 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 CCDC102AQ96A19 550 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 TYW1Q9NV66 732 aaKnown RBP14.15□□□□□ -0.14
CPSF6-201ENST00000266679 SYNPO2Q9UMS6 1093 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 TMX2Q9Y320 296 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 PDXKO00764 312 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 AKAP3O75969 853 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 FAM13AO94988 1023 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 TCP1P17987 556 aaKnown RBP14.15□□□□□ -0.14
CPSF6-201ENST00000266679 CASP4P49662 377 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 KCNA1Q09470 495 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 CCDC181Q5TID7 509 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 TCERG1LQ5VWI1 586 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 RINT1Q6NUQ1 792 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 TRPM4Q8TD43 1214 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 FAM151AQ8WW52 585 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 GDAP1L1Q96MZ0 367 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 HINFPQ9BQA5 517 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 VPS33BQ9H267 617 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 IKZF4Q9H2S9 585 aa14.15□□□□□ -0.14
CPSF6-201ENST00000266679 A0A087X0T9 212 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 FAM228BP0C875 321 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 MYBL2P10244 700 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 EPB41P11171 864 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 XRCC5P13010 732 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 DNA2P51530 1060 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 MRPS25P82663 173 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 SLC18A3Q16572 532 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 BMT2Q1RMZ1 405 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 KLHDC7AQ5VTJ3 777 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 CCDC70Q6NSX1 233 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 OTOP1Q7RTM1 612 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 MSL3Q8N5Y2 521 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 PACSIN1Q9BY11 444 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 RANBP17Q9H2T7 1088 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 ACBD3Q9H3P7 528 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 LUC7LQ9NQ29 371 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 FAN1Q9Y2M0 1017 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 MYH11P35749 1972 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 ZBTB39O15060 712 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 GAS7O60861 476 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 PALMO75781 387 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 PRLRP16471 622 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 NMT1P30419 496 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 ZNF572Q7Z3I7 529 aaPredicted RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 MMGT1Q8N4V1 131 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
CPSF6-201ENST00000266679 TLR10Q9BXR5 811 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 TUFT1Q9NNX1 390 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 AIPL1Q9NZN9 384 aa14.14□□□□□ -0.15
CPSF6-201ENST00000266679 ZMYM2Q9UBW7 1377 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 TMEM88BA6NKF7 163 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 PSMD10O75832 226 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 SLITRK3O94933 977 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 FTCDO95954 541 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 GAP43P17677 238 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 KLRC1P26715 233 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 TRAF1Q13077 416 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 EXOC3L4Q17RC7 722 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 MYCT1Q8N699 235 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 SPATA4Q8NEY3 305 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 SLC5A5Q92911 643 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 SPAG5Q96R06 1193 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 HSD17B14Q9BPX1 270 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 LRRC1Q9BTT6 524 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 TMEM39BQ9GZU3 492 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 ADARB2Q9NS39 739 aaKnown RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 ADAMTS1Q9UHI8 967 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 SLC16A3O15427 465 aaKnown RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 EGFRP00533 1210 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 RPL13P26373 211 aaKnown RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 PON1P27169 355 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
CPSF6-201ENST00000266679 PPP2R5CQ13362 524 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 EPHA7Q15375 998 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 NAB2Q15742 525 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 HSP90B2PQ58FF3 399 aa14.13□□□□□ -0.15
CPSF6-201ENST00000266679 DPY19L2P1Q6NXN4 242 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms