RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 NEDD4P46934 1319 aa7.92□□□□□ -1.14
SMARCE1-201ENST00000264640 COL4A6Q14031 1691 aa7.92□□□□□ -1.14
SMARCE1-201ENST00000264640 RALGAPA2Q2PPJ7 1873 aa7.92□□□□□ -1.14
SMARCE1-201ENST00000264640 CACNA1HO95180 2353 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 CYP2D7A0A087X1C5 515 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 MMP1P03956 469 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 IQCF3P0C7M6 154 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 SFPQP23246 707 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 MARCKSP29966 332 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 IRS1P35568 1242 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 WDR5P61964 334 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 NKX3-2P78367 333 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 MYL5Q02045 173 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 CTDSPL2Q05D32 466 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 PPARAQ07869 468 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 TCF15Q12870 199 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 PTPN14Q15678 1187 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 NTRK3Q16288 839 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 FAM47CQ5HY64 1035 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 FAM117BQ6P1L5 589 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 CERS3Q8IU89 383 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 FBXO16Q8IX29 292 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 ZNF654Q8IZM8 581 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 PDCL2Q8N4E4 241 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 TRIML1Q8N9V2 468 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 CNNM3Q8NE01 707 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 SPSB2Q99619 263 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 SLF1Q9BQI6 1058 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 RNF26Q9BY78 433 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 CRNKL1Q9BZJ0 848 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 GOPCQ9HD26 462 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 LMCD1Q9NZU5 365 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 TUBE1Q9UJT0 475 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 HPSEQ9Y251 543 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 CACNA1BQ00975 2339 aa7.91□□□□□ -1.14
SMARCE1-201ENST00000264640 PTPRZ1P23471 2315 aaPredicted RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 LINC01553A4QN01 128 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 ST8SIA5O15466 376 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 ZEB2O60315 1214 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 DDAH1O94760 285 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 SKILP12757 684 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 CDC27P30260 824 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 RPIAP49247 311 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 FOXK2Q01167 660 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 PTPAQ15257 358 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 CLUL1Q15846 466 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 PUS10Q3MIT2 529 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 IFIT1BQ5T764 474 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 KRBA2Q6ZNG9 492 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 METTL3Q86U44 580 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 RAB11FIP4Q86YS3 637 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 DIS3L2Q8IYB7 885 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 LCORLQ8N3X6 602 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 MLKLQ8NB16 471 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 FANCBQ8NB91 859 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 KIF18AQ8NI77 898 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 NEK9Q8TD19 979 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 CACTINQ8WUQ7 758 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 PHKBQ93100 1093 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 TGS1Q96RS0 853 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 C17orf80Q9BSJ5 609 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 EPB41L4AQ9HCS5 686 aaPredicted RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 SWAP70Q9UH65 585 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 KCNH3Q9ULD8 1083 aa7.9□□□□□ -1.14
SMARCE1-201ENST00000264640 RIF1Q5UIP0 2472 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 FAM186AA6NE01 2351 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 GOLGA6L9A6NEM1 432 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 MINDY4BA8MYZ0 360 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 ZSCAN12O43309 604 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 PRPF3O43395 683 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 PRKAB2O43741 272 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 PPFIA3O75145 1194 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 SERPINC1P01008 464 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 MYL3P08590 195 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 SUPT20HL2P0C7V6 817 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 RFC2P35250 354 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 KRT2P35908 639 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 CDK8P49336 464 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 CHMP4BP1P59074 171 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 ERVK-21P61565 698 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 FANCCQ00597 558 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 PDE4BQ07343 736 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 TCTN1Q2MV58 587 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 TREML4Q6UXN2 200 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 TMC6Q7Z403 805 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 FILIP1Q7Z7B0 1213 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 FCHSD1Q86WN1 690 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 ADHFE1Q8IWW8 467 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 FAM177A1Q8N128 213 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 RETREG2Q8NC44 543 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 CTCFLQ8NI51 663 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 UBE2Q2Q8WVN8 375 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 SMARCE1Q969G3 411 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
SMARCE1-201ENST00000264640 ZSCAN10Q96SZ4 725 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms