RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 LXNQ9BS40 222 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 MYO1CO00159 1063 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 DHX9Q08211 1270 aaKnown RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 SLC35G1Q2M3R5 365 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 CCDC121Q6ZUS5 278 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 CARSP49589 748 aaKnown RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 SCFD1Q8WVM8 642 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 KIFAP3Q92845 792 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 ZBTB39O15060 712 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 BUB1BO60566 1050 aaPredicted RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 KRT14P02533 472 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 LMNB1P20700 586 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 SMARCA1P28370 1054 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 SNX1Q13596 522 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 RUFY4Q6ZNE9 571 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 APTXQ7Z2E3 356 aaKnown RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 ZNF507Q8TCN5 953 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 MTMR8Q96EF0 704 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 RUSC1Q9BVN2 902 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 NYAP2Q9P242 653 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.76□□□□□ -0.05
RAB3D-201ENST00000222120 EXOC7Q9UPT5 735 aa14.76□□□□□ -0.05
RAB3D-201ENST00000222120 SLC16A4O15374 487 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 STRIP1Q5VSL9 837 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 CEP170P1Q96L14 293 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 AMACRQ9UHK6 382 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 MSH4O15457 936 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 SLCO1A2P46721 670 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 MXI1P50539 228 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 PRELPP51888 382 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 CEP55Q53EZ4 464 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 RNF10Q8N5U6 811 aaKnown RBP14.75□□□□□ -0.05
RAB3D-201ENST00000222120 DNAJC17Q9NVM6 304 aaKnown RBP14.75□□□□□ -0.05
RAB3D-201ENST00000222120 A0A1W2PRG0 241 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 PDE2AO00408 941 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-201ENST00000222120 ZSCAN5CA6NGD5 496 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-201ENST00000222120 APOBEC3HQ6NTF7 200 aaKnown RBP14.75□□□□□ -0.05
RAB3D-201ENST00000222120 TAB3Q8N5C8 712 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-201ENST00000222120 SAAL1Q96ER3 474 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 TMEM39BQ9GZU3 492 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 ANKFY1Q9P2R3 1169 aa14.75□□□□□ -0.05
RAB3D-201ENST00000222120 LRRIQ4A6NIV6 560 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 FANCGO15287 622 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 RPA1P27694 616 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 ADCY1Q08828 1119 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 STRN3Q13033 797 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 ECM1Q16610 540 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 EMBQ6PCB8 327 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 HAS1Q92839 578 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 CABS1Q96KC9 395 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 MTMR9Q96QG7 549 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 HPCAL4Q9UM19 191 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 SSU72P8A0A1W2PR75 194 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 EYA4O95677 639 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 SEMA3FQ13275 785 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 DMP1Q13316 513 aaPredicted RBP14.74□□□□□ -0.05
RAB3D-201ENST00000222120 CAPN12Q6ZSI9 719 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 MSANTD4Q8NCY6 345 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 PPM1EQ8WY54 764 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 ZNF653Q96CK0 615 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 GINS2Q9Y248 185 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 DAAM1Q9Y4D1 1078 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 POLRMTO00411 1230 aaKnown RBP14.74□□□□□ -0.05
RAB3D-201ENST00000222120 TRIM66O15016 1216 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 KCNA1Q09470 495 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 EEPD1Q7L9B9 569 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 RAB17Q9H0T7 212 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 TMOD4Q9NZQ9 345 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 SEPT9Q9UHD8 586 aaPredicted RBP14.74□□□□□ -0.05
RAB3D-201ENST00000222120 PLAAQ9Y263 795 aa14.74□□□□□ -0.05
RAB3D-201ENST00000222120 HIP1RO75146 1068 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 IFNAR2P48551 515 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 MIIPQ5JXC2 388 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 DENND2CQ68D51 928 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 FMNL3Q8IVF7 1028 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 FGFBP2Q9BYJ0 223 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 RNF14Q9UBS8 474 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 SNX24Q9Y343 169 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 A0A1W2PQJ5 194 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 KIF4AO95239 1232 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 LIG4P49917 911 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 TRIP13Q15645 432 aaPredicted RBP14.73□□□□□ -0.05
RAB3D-201ENST00000222120 TTLL6Q8N841 843 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 ACCSQ96QU6 501 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 PDXKO00764 312 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 AKAP3O75969 853 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 CASP5P51878 434 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 PAPD7Q5XG87 772 aaKnown RBP14.73□□□□□ -0.05
RAB3D-201ENST00000222120 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 AGBL1Q96MI9 1066 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 KMT5AQ9NQR1 393 aa14.73□□□□□ -0.05
RAB3D-201ENST00000222120 NOVA2Q9UNW9 492 aaKnown RBP14.73□□□□□ -0.05
RAB3D-201ENST00000222120 FAM86B1E9PN63 330 aa14.72□□□□□ -0.05
RAB3D-201ENST00000222120 EVI5O60447 810 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms