RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 WDR44Q5JSH3 913 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
CSTF1-201ENST00000217109 SUPT20HQ8NEM7 779 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 KIFAP3Q92845 792 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 PLAAQ9Y263 795 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
CSTF1-201ENST00000217109 NID2Q14112 1375 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 ZSCAN5CA6NGD5 496 aaPredicted RBP10.6□□□□□ -0.71
CSTF1-201ENST00000217109 IPO5O00410 1097 aaKnown RBP10.6□□□□□ -0.71
CSTF1-201ENST00000217109 NR1D1P20393 614 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 ECE1P42892 770 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 MEA1Q16626 185 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 FIGNQ5HY92 759 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 ALS2CLQ60I27 953 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 HHIPL2Q6UWX4 724 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 NIM1KQ8IY84 436 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 MGARPQ8TDB4 240 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 POMGNT1Q8WZA1 660 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 ZNF341Q9BYN7 854 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 DAAM1Q9Y4D1 1078 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 KIF4AO95239 1232 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 RPA1P27694 616 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 DDR1Q08345 913 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 PBKQ96KB5 322 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 SCLT1Q96NL6 688 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 IMPG2Q9BZV3 1241 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 NYAP2Q9P242 653 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 CHORDC1Q9UHD1 332 aaPredicted RBP10.6□□□□□ -0.71
CSTF1-201ENST00000217109 EXOC7Q9UPT5 735 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 SPEF2Q9C093 1822 aa10.6□□□□□ -0.71
CSTF1-201ENST00000217109 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 A0A1W2PRG0 241 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 ZBED4O75132 1171 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 SLCO1A2P46721 670 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 MTMR3Q13615 1198 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 DENND2CQ68D51 928 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 CERS5Q8N5B7 392 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 HAS1Q92839 578 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 IFT74Q96LB3 600 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 LXNQ9BS40 222 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 NOVA2Q9UNW9 492 aaKnown RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 CAPN7Q9Y6W3 813 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 PDXKO00764 312 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 HNRNPDLO14979 420 aaKnown RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 MSH4O15457 936 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 MXI1P50539 228 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 PRELPP51888 382 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 ECM1Q16610 540 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 PADI6Q6TGC4 694 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 FRMD5Q7Z6J6 570 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 ACER1Q8TDN7 264 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 IPO4Q8TEX9 1081 aaKnown RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 RUSC1Q9BVN2 902 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 SART1O43290 800 aaKnown RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 EYA4O95677 639 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 IFT88Q13099 833 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 SNX1Q13596 522 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 CEP55Q53EZ4 464 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 GLE1Q53GS7 698 aaKnown RBP10.59□□□□□ -0.71
CSTF1-201ENST00000217109 SLC27A3Q5K4L6 730 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 C10orf76Q5T2E6 689 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 CEP57Q86XR8 500 aa10.59□□□□□ -0.71
CSTF1-201ENST00000217109 ANKRD62A6NC57 917 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 RGS16O15492 202 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 DAPK3O43293 454 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 WHAMMQ8TF30 809 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 FAM163AQ96GL9 167 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 SYNCQ9H7C4 482 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 SIK3Q9Y2K2 1263 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 SNX24Q9Y343 169 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 A6NNZ2 444 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 MAP2K7O14733 419 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 EVI5O60447 810 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 AKAP3O75969 853 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 IFNAR2P48551 515 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 GALCP54803 685 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 NAB2Q15742 525 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 EDRF1Q3B7T1 1238 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 OR2W6PQ8NHA6 318 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 ZNF653Q96CK0 615 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 NOC2LQ9Y3T9 749 aaKnown RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 ZBTB39O15060 712 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 SLC16A4O15374 487 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 MYBL2P10244 700 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 GIT2Q14161 759 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 STRIP1Q5VSL9 837 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 KLHDC7AQ5VTJ3 777 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 APOBEC3HQ6NTF7 200 aaKnown RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 ZNF365Q70YC5 407 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms