RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cse1lQ9ERK4 971 aaKnown RBP20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Arhgef7Q9ES28 862 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Gfpt2Q9Z2Z9 682 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Cyb5rlB1AS42 316 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 DgkiD3YWQ0 1071 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Zfp213E9QAW0 468 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Sema4dO09126 861 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Tnfrsf11aO35305 625 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Il13ra2O88786 383 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Adgrg6Q6F3F9 1165 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ccdc134Q8C7V8 229 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 BcamQ9R069 622 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Cyp2ab1S4R196 498 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ambra1A2AH22 1300 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ttc6G3UYY4 1857 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 1700017N19RikA0A087WPJ1 469 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lrrc38A2VDH3 298 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Eif3dO70194 548 aaKnown RBP20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Tp53P02340 387 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lrig3Q6P1C6 1117 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Phf8Q80TJ7 1023 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ccdc113Q8C5T8 377 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Bcas3Q8CCN5 928 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lsm14bQ8CGC4 385 aaKnown RBP20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Coa7Q921H9 231 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 RpainQ9CWY9 219 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Pabpc6Q9D4E6 643 aaKnown RBP20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Eid1Q9DCR4 169 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Tlr2Q9QUN7 784 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 GgcxQ9QYC7 757 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lypla2Q9WTL7 231 aa20.41■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Zc3h7bF8VPP8 982 aaKnown RBP20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Usp17ldG5E8G2 545 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Usp17lcG5E8I7 545 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Rad51bO35719 350 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Nmt1O70310 496 aaKnown RBP20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Mucl2P02815 138 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 RelaQ04207 549 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Scarf1Q5ND28 820 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Krt15Q61414 452 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Pick1Q62083 416 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Zdhhc24Q6IR37 284 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Pja2Q80U04 707 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 DcakdQ8BHC4 231 aaKnown RBP20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 MypopQ8R4U1 393 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 CrygnQ8VHL5 183 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Gm28036V9GXJ1 658 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 SynrgQ5SV85 1306 aa20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Myh10Q61879 1976 aaKnown RBP20.4■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Fam129cD3YZB0 591 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Znf354cQ571J5 560 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Rnaseh2bQ80ZV0 308 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ccdc28aQ8CEI3 192 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Znrd1-asQ8R0E5 213 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Enox2Q8R0Z2 598 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 3830403N18RikQ9D6C3 208 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Fthl17aQ9DAX0 182 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 MefvQ9JJ26 767 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Hyou1Q9JKR6 999 aaKnown RBP20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ankrd2Q9WV06 328 aa20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Pacsin2Q9WVE8 486 aaKnown RBP20.39■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ace3D0G895 737 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Traf5P70191 558 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gja5Q01231 358 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Siah1bQ06985 282 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Hdgfl1Q2VPR5 283 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Klra5Q60652 266 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Rassf2Q8BMS9 326 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 BlmhQ8R016 455 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Fam111aQ9D2L9 613 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Nup50Q9JIH2 466 aaKnown RBP20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Cdc42ep4Q9JM96 349 aaKnown RBP20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Cog1Q9Z160 980 aa20.39■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Scgb2b7D3YYY1 112 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tagap1P0CAX8 505 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Nt5c2Q3V1L4 560 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Dph1Q5NCQ5 438 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Atp13a4Q5XF90 1193 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Kif5bQ61768 963 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Fgfr1opQ66JX5 399 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 P2ry10Q8BFU7 328 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 CnstQ8CBC4 711 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Atp6v0a4Q920R6 833 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ctnnd1P30999 938 aaKnown RBP20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Phactr1Q2M3X8 580 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tsga10Q6NY15 697 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 IvdQ9JHI5 424 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 NynrinQ5DTZ0 1840 aa20.38■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm4907B1AXB9 411 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tspyl3Q3UYP3 334 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Sorbs1Q62417 1290 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 ArpinQ9D0A3 226 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ubiad1Q9DC60 336 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 IkQ9Z1M8 557 aaKnown RBP20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm8298J3QPI0 401 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Cpsf2O35218 782 aaKnown RBP20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Sox13Q04891 613 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Grik5Q61626 979 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Fam228aQ8CDW1 299 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ago4Q8CJF8 861 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms