RNA–Protein interactions for RNA: snR8

snR8, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR8, Length 190 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR8	snR8	NCA2	Q12374	616 aa		0.49	□□□□□ -2.33
snR8	snR8	YAL067W-A	Q8TGK6	75 aa		0.49	□□□□□ -2.33
snR8	snR8	ADH3	P07246	375 aa	Known RBP	0.48	□□□□□ -2.33
snR8	snR8	MET8	P15807	274 aa		0.48	□□□□□ -2.33
snR8	snR8	ATP3	P38077	311 aa	Known RBP	0.48	□□□□□ -2.33
snR8	snR8	TOS3	P43637	560 aa		0.48	□□□□□ -2.33
snR8	snR8	PHO86	P46956	311 aa		0.48	□□□□□ -2.33
snR8	snR8	YMR155W	Q03795	547 aa		0.48	□□□□□ -2.33
snR8	snR8	CLP1	Q08685	445 aa	Predicted RBP	0.48	□□□□□ -2.33
snR8	snR8	HOM3	P10869	527 aa		0.47	□□□□□ -2.33
snR8	snR8	KRE2	P27809	442 aa		0.47	□□□□□ -2.33
snR8	snR8	NOP4	P37838	685 aa	Known RBP	0.47	□□□□□ -2.33
snR8	snR8	VAC7	P53950	1165 aa		0.47	□□□□□ -2.33
snR8	snR8	MSC3	Q05812	728 aa		0.47	□□□□□ -2.33
snR8	snR8	GEX1	P25596	615 aa		0.46	□□□□□ -2.34
snR8	snR8	BEM1	P29366	551 aa		0.46	□□□□□ -2.34
snR8	snR8	SPS19	P32573	292 aa	Known RBP	0.46	□□□□□ -2.34
snR8	snR8	RAD5	P32849	1169 aa	Predicted RBP	0.46	□□□□□ -2.34
snR8	snR8	YKR032W	P36127	104 aa		0.46	□□□□□ -2.34
snR8	snR8	MMS4	P38257	691 aa		0.46	□□□□□ -2.34
snR8	snR8	ECM14	P38836	430 aa		0.46	□□□□□ -2.34
snR8	snR8	HEM14	P40012	539 aa		0.46	□□□□□ -2.34
snR8	snR8	UFE1	P41834	346 aa		0.46	□□□□□ -2.34
snR8	snR8	VPS75	P53853	264 aa		0.46	□□□□□ -2.34
snR8	snR8	RMI1	Q02685	241 aa		0.46	□□□□□ -2.34
snR8	snR8	URH1	Q04179	340 aa		0.46	□□□□□ -2.34
snR8	snR8	RKM1	Q08961	583 aa	Predicted RBP	0.46	□□□□□ -2.34
snR8	snR8	RAD23	P32628	398 aa	Known RBP	0.45	□□□□□ -2.34
snR8	snR8	ECM8	P38246	354 aa		0.45	□□□□□ -2.34
snR8	snR8	SHE3	P38272	425 aa	Known RBP	0.45	□□□□□ -2.34
snR8	snR8	RBG1	P39729	369 aa		0.45	□□□□□ -2.34
snR8	snR8	RRP46	P53256	223 aa	Predicted RBP	0.45	□□□□□ -2.34
snR8	snR8	SNT309	Q06091	175 aa	Predicted RBP	0.45	□□□□□ -2.34
snR8	snR8	SIL1	Q08199	421 aa		0.45	□□□□□ -2.34
snR8	snR8	YDL211C	Q12121	372 aa		0.45	□□□□□ -2.34
snR8	snR8	FLO11	P08640	1367 aa		0.45	□□□□□ -2.34
snR8	snR8	SEM1	O94742	89 aa		0.44	□□□□□ -2.34
snR8	snR8	SCEI	P03882	235 aa		0.44	□□□□□ -2.34
snR8	snR8	IMA3	P0CW40	589 aa		0.44	□□□□□ -2.34
snR8	snR8	IMA4	P0CW41	589 aa		0.44	□□□□□ -2.34
snR8	snR8	RNH201	P53942	307 aa		0.44	□□□□□ -2.34
snR8	snR8	YPL113C	Q02961	396 aa		0.44	□□□□□ -2.34
snR8	snR8	YMR018W	Q04364	514 aa		0.44	□□□□□ -2.34
snR8	snR8	IMA2	Q08295	589 aa		0.44	□□□□□ -2.34
snR8	snR8	SFM1	Q12314	213 aa		0.44	□□□□□ -2.34
snR8	snR8	HXT3	P32466	567 aa	Known RBP	0.43	□□□□□ -2.34
snR8	snR8	YBR241C	P38142	488 aa		0.43	□□□□□ -2.34
snR8	snR8	MED6	P38782	295 aa		0.43	□□□□□ -2.34
snR8	snR8	BDH1	P39714	382 aa		0.43	□□□□□ -2.34
snR8	snR8	CTK3	P46963	296 aa	Predicted RBP	0.43	□□□□□ -2.34
snR8	snR8	RQC1	Q05468	723 aa	Known RBP	0.43	□□□□□ -2.34
snR8	snR8	OPY2	Q06810	360 aa		0.43	□□□□□ -2.34
snR8	snR8	VPS54	Q12071	889 aa		0.43	□□□□□ -2.34
snR8	snR8	HSP42	Q12329	375 aa		0.43	□□□□□ -2.34
snR8	snR8	SSC1	P0CS90	654 aa	Known RBP	0.42	□□□□□ -2.34
snR8	snR8	COX10	P21592	462 aa		0.42	□□□□□ -2.34
snR8	snR8	PCL7	P40186	285 aa		0.42	□□□□□ -2.34
snR8	snR8	RMD8	P43620	662 aa		0.42	□□□□□ -2.34
snR8	snR8	SHE4	P51534	789 aa		0.42	□□□□□ -2.34
snR8	snR8	STD1	Q02794	444 aa		0.42	□□□□□ -2.34
snR8	snR8	MRX11	Q03079	207 aa		0.42	□□□□□ -2.34
snR8	snR8	ATG16	Q03818	150 aa		0.42	□□□□□ -2.34
snR8	snR8	HIF1	Q12373	385 aa		0.42	□□□□□ -2.34
snR8	snR8	POM152	P39685	1337 aa		0.41	□□□□□ -2.34
snR8	snR8	CUP2	P15315	225 aa		0.41	□□□□□ -2.34
snR8	snR8	SPO23	P33757	523 aa		0.41	□□□□□ -2.34
snR8	snR8	ASN2	P49090	572 aa	Known RBP	0.41	□□□□□ -2.34
snR8	snR8	REX2	P54964	269 aa	Known RBP	0.41	□□□□□ -2.34
snR8	snR8	SED5	Q01590	340 aa		0.41	□□□□□ -2.34
snR8	snR8	RLP24	Q07915	199 aa	Known RBP	0.41	□□□□□ -2.34
snR8	snR8	RPS18A	P0CX55	146 aa	Known RBP	0.4	□□□□□ -2.35
snR8	snR8	RPS18B	P0CX56	146 aa	Predicted RBP	0.4	□□□□□ -2.35
snR8	snR8	HPR1	P17629	752 aa	Known RBP	0.4	□□□□□ -2.35
snR8	snR8	ANP1	P32629	500 aa		0.4	□□□□□ -2.35
snR8	snR8	HSH155	P49955	971 aa	Known RBP	0.4	□□□□□ -2.35
snR8	snR8	FMS1	P50264	508 aa		0.4	□□□□□ -2.35
snR8	snR8	BUG1	Q12191	341 aa		0.4	□□□□□ -2.35
snR8	snR8	VAM3	Q12241	283 aa		0.4	□□□□□ -2.35
snR8	snR8	TDH2	P00358	332 aa	Known RBP	0.39	□□□□□ -2.35
snR8	snR8	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.39	□□□□□ -2.35	not detected
snR8	snR8	MET2	P08465	486 aa		0.39	□□□□□ -2.35
snR8	snR8	CPT1	P17898	393 aa		0.39	□□□□□ -2.35
snR8	snR8	OCA4	P25366	362 aa		0.39	□□□□□ -2.35
snR8	snR8	RRN10	P38204	145 aa		0.39	□□□□□ -2.35
snR8	snR8	ASP1	P38986	381 aa	Predicted RBP	0.39	□□□□□ -2.35
snR8	snR8	SMD1	Q02260	146 aa	Predicted RBP	0.39	□□□□□ -2.35
snR8	snR8	HMS1	Q12398	434 aa		0.39	□□□□□ -2.35
snR8	snR8	PCL9	Q12477	304 aa		0.39	□□□□□ -2.35
snR8	snR8	STE2	D6VTK4	431 aa		0.38	□□□□□ -2.35
snR8	snR8	RPL3	P14126	387 aa	Known RBP	0.38	□□□□□ -2.35
snR8	snR8	CHA1	P25379	360 aa	Known RBP	0.38	□□□□□ -2.35
snR8	snR8	GPI10	P30777	616 aa		0.38	□□□□□ -2.35
snR8	snR8	SHE1	P38200	338 aa		0.38	□□□□□ -2.35
snR8	snR8	YMR262W	P38430	313 aa		0.38	□□□□□ -2.35
snR8	snR8	MMT1	Q03218	510 aa		0.38	□□□□□ -2.35
snR8	snR8	YOL029C	Q08187	201 aa		0.38	□□□□□ -2.35
snR8	snR8	GCN4	P03069	281 aa		0.37	□□□□□ -2.35
snR8	snR8	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.37	□□□□□ -2.35	not detected
snR8	snR8	UNG1	P12887	359 aa		0.37	□□□□□ -2.35
snR8	snR8	AAC3	P18238	307 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms