RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	SNU56	Q03782	492 aa	Known RBP	4.82	□□□□□ -1.64
GDB1	YPR184W	GEX1	P25596	615 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SAC1	P32368	623 aa	Known RBP	4.81	□□□□□ -1.64
GDB1	YPR184W	PET112	P33893	541 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	GEX2	P36173	615 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	MAP2	P38174	421 aa	Known RBP	4.81	□□□□□ -1.64
GDB1	YPR184W	RPL10	P41805	221 aa	Known RBP	4.81	□□□□□ -1.64
GDB1	YPR184W	RIM8	P53179	542 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YGR079W	P53249	370 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SEC12	P11655	471 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	KGD1	P20967	1014 aa	Known RBP	4.81	□□□□□ -1.64
GDB1	YPR184W	CNA1	P23287	553 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	ERG8	P24521	451 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	BUB3	P26449	341 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	RIP-Chip
GDB1	YPR184W	MRPL17	P36528	281 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	VAC7	P53950	1165 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	ECM18	Q04623	453 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SLD7	Q08457	257 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	IRC13	Q08630	104 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SUL2	Q12325	893 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	TIM9	O74700	87 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	PPZ1	P26570	692 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	COG5	P53951	403 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YNL033W	P53964	284 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YNL019C	P53975	284 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YLR283W	Q05867	314 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YDL114W	Q07530	308 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	IRC19	Q07843	230 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	ICT1	Q12385	394 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	TAO3	P40468	2376 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SNF4	P12904	322 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SNF5	P18480	905 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SRY1	P36007	326 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YHR180W	P38868	163 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	PET100	P38958	111 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	PRK1	P40494	810 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	IRC5	P43610	853 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	MOG1	P47123	218 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YPT32	P51996	222 aa	Known RBP	4.81	□□□□□ -1.64
GDB1	YPR184W	RRN9	P53437	365 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SOG2	Q08817	791 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	SLF1	Q12034	447 aa	Known RBP	4.81	□□□□□ -1.64
GDB1	YPR184W	YDL109C	Q12103	647 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	LCB4	Q12246	624 aa		4.81	□□□□□ -1.64
GDB1	YPR184W	YMR084W	A2P2R3	262 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	YPK3	P38070	525 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	POA1	P38218	177 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	MGE1	P38523	228 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	LNP1	P38878	278 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	YHB1	P39676	399 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	ECM1	P39715	212 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	SNO2	P53823	222 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	NAT4	Q04751	285 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	RKM1	Q08961	583 aa	Predicted RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	TPK3	P05986	398 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	ARF1	P11076	181 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	YRO2	P38079	344 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	ROT2	P38138	954 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	OTU1	P43558	301 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	DUG1	P43616	481 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	YPL113C	Q02961	396 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	RIF2	Q06208	395 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	GLO4	Q12320	285 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	STB3	Q12427	513 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	YPT1	P01123	206 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	ILV2	P07342	687 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	SLM5	P25345	492 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	DBF20	P32328	564 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	MSS1	P32559	526 aa	Predicted RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	MTH1	P35198	433 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	SRP102	P36057	244 aa	Predicted RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	FMP23	P38231	175 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	CEM1	P39525	442 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	KRE29	P40026	464 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	ATG18	P43601	500 aa		4.8	□□□□□ -1.64
GDB1	YPR184W	YMR265C	Q03508	461 aa	Known RBP	4.8	□□□□□ -1.64
GDB1	YPR184W	HXT3	P32466	567 aa	Known RBP	4.79	□□□□□ -1.64
GDB1	YPR184W	RSM22	P36056	628 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	HXT6	P39003	570 aa	Known RBP	4.79	□□□□□ -1.64
GDB1	YPR184W	HXT7	P39004	570 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	YGR015C	P53208	328 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	YNR048W	P53740	393 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	TPS1	Q00764	495 aa	Known RBP	4.79	□□□□□ -1.64
GDB1	YPR184W	YPL039W	Q03080	316 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	PML39	Q03760	334 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	NDE2	Q07500	545 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	YFH1	Q07540	174 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	HMS1	Q12398	434 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	GCN4	P03069	281 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	CBP6	P07253	162 aa	Predicted RBP	4.79	□□□□□ -1.64
GDB1	YPR184W	TY2A-LR1	P0C2J4	438 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	YAR066W	P0CX18	203 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	YHR214W	P0CX19	203 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	TY2A-F	P0CX61	438 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	TY2A-GR2	P0CX62	438 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	DBR1	P24309	405 aa	Known RBP	4.79	□□□□□ -1.64
GDB1	YPR184W	TY2A-C	P25383	438 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	YJU3	P28321	313 aa		4.79	□□□□□ -1.64
GDB1	YPR184W	PTM1	P32857	523 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms