RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YDL109CQ12103 647 aa5.7□□□□□ -1.5
VPS4YPR173C MHT1Q12525 324 aa5.7□□□□□ -1.5
VPS4YPR173C GLT1Q12680 2145 aaKnown RBP5.69□□□□□ -1.5
VPS4YPR173C CYC1P00044 109 aaPredicted RBP5.69□□□□□ -1.5
VPS4YPR173C KAR1P11927 433 aa5.69□□□□□ -1.5
VPS4YPR173C LAT1P12695 482 aaKnown RBP5.69□□□□□ -1.5
VPS4YPR173C SGV1P23293 657 aaKnown RBP5.69□□□□□ -1.5
VPS4YPR173C MIH1P23748 554 aa5.69□□□□□ -1.5
VPS4YPR173C RBK1P25332 333 aa5.69□□□□□ -1.5
VPS4YPR173C NFS1P25374 497 aa5.69□□□□□ -1.5
VPS4YPR173C AGP1P25376 633 aa5.69□□□□□ -1.5
VPS4YPR173C ARE1P25628 610 aa5.69□□□□□ -1.5
VPS4YPR173C OAC1P32332 324 aa5.69□□□□□ -1.5
VPS4YPR173C HYM1P32464 399 aa5.69□□□□□ -1.5
VPS4YPR173C LIP5P32875 414 aa5.69□□□□□ -1.5
VPS4YPR173C IFA38P38286 347 aa5.69□□□□□ -1.5
VPS4YPR173C YBR225WP38321 900 aa5.69□□□□□ -1.5
VPS4YPR173C NVJ1P38881 321 aa5.69□□□□□ -1.5
VPS4YPR173C YHR202WP38887 602 aa5.69□□□□□ -1.5
VPS4YPR173C IME4P41833 600 aa5.69□□□□□ -1.5
VPS4YPR173C GDS1P41913 522 aa5.69□□□□□ -1.5
VPS4YPR173C SSU1P41930 458 aa5.69□□□□□ -1.5
VPS4YPR173C BPL1P48445 690 aaPredicted RBP5.69□□□□□ -1.5
VPS4YPR173C HNT2P49775 206 aa5.69□□□□□ -1.5
VPS4YPR173C TRM112P53738 135 aaPredicted RBP5.69□□□□□ -1.5
VPS4YPR173C LSM7P53905 115 aaKnown RBP5.69□□□□□ -1.5
VPS4YPR173C NSE5Q03718 556 aa5.69□□□□□ -1.5
VPS4YPR173C SPO77Q06134 477 aa5.69□□□□□ -1.5
VPS4YPR173C RSC3Q06639 885 aa5.69□□□□□ -1.5
VPS4YPR173C HBT1Q07653 1046 aaKnown RBP5.69□□□□□ -1.5
VPS4YPR173C RRG7Q08774 242 aaPredicted RBP5.69□□□□□ -1.5
VPS4YPR173C FEX2Q08991 375 aa5.69□□□□□ -1.5
VPS4YPR173C ENV7Q12003 364 aa5.69□□□□□ -1.5
VPS4YPR173C PKH2Q12236 1081 aaKnown RBP5.69□□□□□ -1.5
VPS4YPR173C SFM1Q12314 213 aa5.69□□□□□ -1.5
VPS4YPR173C SPS2P08459 502 aa5.68□□□□□ -1.5
VPS4YPR173C SCH9P11792 824 aaKnown RBP5.68□□□□□ -1.5
VPS4YPR173C CPR3P25719 182 aa5.68□□□□□ -1.5
VPS4YPR173C SFP1P32432 683 aa5.68□□□□□ -1.5
VPS4YPR173C SEC17P32602 292 aa5.68□□□□□ -1.5
VPS4YPR173C TIP20P33891 701 aa5.68□□□□□ -1.5
VPS4YPR173C LOT5P34234 306 aa5.68□□□□□ -1.5
VPS4YPR173C ANR2P36090 516 aaPredicted RBP5.68□□□□□ -1.5
VPS4YPR173C APE3P37302 537 aaKnown RBP5.68□□□□□ -1.5
VPS4YPR173C MNN2P38069 597 aa5.68□□□□□ -1.5
VPS4YPR173C YBR284WP38150 797 aa5.68□□□□□ -1.5
VPS4YPR173C APM3P38153 483 aa5.68□□□□□ -1.5
VPS4YPR173C BIG1P38813 335 aa5.68□□□□□ -1.5
VPS4YPR173C YFL052WP43551 465 aa5.68□□□□□ -1.5
VPS4YPR173C GAT1P43574 510 aa5.68□□□□□ -1.5
VPS4YPR173C IRC7P43623 340 aa5.68□□□□□ -1.5
VPS4YPR173C SIP4P46954 829 aa5.68□□□□□ -1.5
VPS4YPR173C LSM1P47017 172 aaKnown RBP5.68□□□□□ -1.5
VPS4YPR173C HXT16P47185 567 aa5.68□□□□□ -1.5
VPS4YPR173C PRP24P49960 444 aaKnown RBP5.68□□□□□ -1.5
VPS4YPR173C YGR067CP53243 804 aa5.68□□□□□ -1.5
VPS4YPR173C RRN9P53437 365 aa5.68□□□□□ -1.5
VPS4YPR173C YNL143CP53908 130 aa5.68□□□□□ -1.5
VPS4YPR173C YPL034WQ03083 165 aa5.68□□□□□ -1.5
VPS4YPR173C TDA1Q03533 586 aa5.68□□□□□ -1.5
VPS4YPR173C TRM82Q03774 444 aa5.68□□□□□ -1.5
VPS4YPR173C VHS1Q03785 461 aa5.68□□□□□ -1.5
VPS4YPR173C MFB1Q04922 465 aa5.68□□□□□ -1.5
VPS4YPR173C VPS74Q06385 345 aa5.68□□□□□ -1.5
VPS4YPR173C GPN3Q06543 272 aa5.68□□□□□ -1.5
VPS4YPR173C TRM8Q12009 286 aa5.68□□□□□ -1.5
VPS4YPR173C YOR012WQ12351 137 aa5.68□□□□□ -1.5
VPS4YPR173C SFG1Q12507 346 aa5.68□□□□□ -1.5
VPS4YPR173C YPR096CO13587 100 aa5.67□□□□□ -1.5
VPS4YPR173C GCN4P03069 281 aa5.67□□□□□ -1.5
VPS4YPR173C CDC21P06785 304 aa5.67□□□□□ -1.5
VPS4YPR173C RPC40P07703 335 aaKnown RBP5.67□□□□□ -1.5
VPS4YPR173C DSF1P0CX08 502 aa5.67□□□□□ -1.5
VPS4YPR173C YNR073CP0CX09 502 aa5.67□□□□□ -1.5
VPS4YPR173C PET54P10834 293 aa5.67□□□□□ -1.5
VPS4YPR173C MRPL8P22353 238 aa5.67□□□□□ -1.5
VPS4YPR173C BUD5P25300 642 aaPredicted RBP5.67□□□□□ -1.5
VPS4YPR173C IDH1P28834 360 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
VPS4YPR173C ERG9P29704 444 aa5.67□□□□□ -1.5
VPS4YPR173C MRPL9P31334 269 aa5.67□□□□□ -1.5
VPS4YPR173C COQ2P32378 372 aa5.67□□□□□ -1.5
VPS4YPR173C RNP1P32385 249 aa5.67□□□□□ -1.5
VPS4YPR173C PET309P32522 965 aaPredicted RBP5.67□□□□□ -1.5
VPS4YPR173C MSS1P32559 526 aaPredicted RBP5.67□□□□□ -1.5
VPS4YPR173C TEF4P36008 412 aaKnown RBP5.67□□□□□ -1.5
VPS4YPR173C YKR051WP36142 418 aa5.67□□□□□ -1.5
VPS4YPR173C MRPL3P36516 390 aa5.67□□□□□ -1.5
VPS4YPR173C YBR063CP38083 404 aa5.67□□□□□ -1.5
VPS4YPR173C SAF1P38352 637 aa5.67□□□□□ -1.5
VPS4YPR173C CTF8P38877 133 aa5.67□□□□□ -1.5
VPS4YPR173C DOT6P40059 670 aaKnown RBP5.67□□□□□ -1.5
VPS4YPR173C VRG4P40107 337 aa5.67□□□□□ -1.5
VPS4YPR173C NDE1P40215 560 aa5.67□□□□□ -1.5
VPS4YPR173C ATG18P43601 500 aa5.67□□□□□ -1.5
VPS4YPR173C VPS25P47142 202 aa5.67□□□□□ -1.5
VPS4YPR173C ECM27P47144 725 aa5.67□□□□□ -1.5
VPS4YPR173C IPI3P53877 555 aa5.67□□□□□ -1.5
VPS4YPR173C FDC1Q03034 503 aa5.67□□□□□ -1.5
VPS4YPR173C PIR3Q03180 325 aa5.67□□□□□ -1.5
VPS4YPR173C YMR087WQ04299 284 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms