RNA–Protein interactions for RNA: YPR125W

YLH47, Transcript of Mitochondrial inner membrane protein, yeast

Gene YLH47, Length 1,365 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLH47	YPR125W	RPL12A	P0CX53	165 aa	Known RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	RPL12B	P0CX54	165 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	SNF3	P10870	884 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	PRP16	P15938	1071 aa	Predicted RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	MDM10	P18409	493 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	YPK2	P18961	677 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	SLM5	P25345	492 aa	Known RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	FUN19	P28003	413 aa	Predicted RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	OCT1	P35999	772 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	CBP4	P37267	147 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	ARG2	P40360	574 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	HXT9	P40885	567 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	CDC1	P40986	491 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	SMM1	P53720	384 aa	Known RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	YIF1	P53845	314 aa	Known RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	HXT11	P54862	567 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	SLT2	Q00772	484 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	SNT309	Q06091	175 aa	Predicted RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	IMA2	Q08295	589 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	YPR022C	Q12139	1133 aa		5.08	□□□□□ -1.6
YLH47	YPR125W	GEA1	P47102	1408 aa	Predicted RBP	5.08	□□□□□ -1.6
YLH47	YPR125W	TDH2	P00358	332 aa	Known RBP	5.07	□□□□□ -1.6
YLH47	YPR125W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
YLH47	YPR125W	MATALPHA1	P0CY06	175 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	HMLALPHA1	P0CY07	175 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	YCP4	P25349	247 aa	Known RBP	5.07	□□□□□ -1.6
YLH47	YPR125W	PRR1	P28708	518 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	ZIP1	P31111	875 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	MMS21	P38632	267 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
YLH47	YPR125W	UBP8	P50102	471 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	DSL1	P53847	754 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	ESBP6	P53918	673 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	YPL068C	Q02749	293 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	ENT5	Q03769	411 aa	Known RBP	5.07	□□□□□ -1.6
YLH47	YPR125W	SMP3	Q04174	516 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	MYO5	Q04439	1219 aa	Known RBP	5.07	□□□□□ -1.6
YLH47	YPR125W	YAP7	Q08182	245 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	SMC5	Q08204	1093 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	GET4	Q12125	312 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	YOR029W	Q12243	111 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	RGS2	Q99188	309 aa		5.07	□□□□□ -1.6
YLH47	YPR125W	COX2	P00410	251 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	RPS16A	P0CX51	143 aa	Known RBP	5.06	□□□□□ -1.6
YLH47	YPR125W	RPS16B	P0CX52	143 aa	Known RBP	5.06	□□□□□ -1.6
YLH47	YPR125W	FRS2	P15625	503 aa	Known RBP	5.06	□□□□□ -1.6
YLH47	YPR125W	YCR006C	P25350	157 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	RAD24	P32641	659 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	ROT2	P38138	954 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	PRM9	P39551	298 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	MIT1	P40002	666 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	LCP5	P40079	357 aa	Predicted RBP	5.06	□□□□□ -1.6
YLH47	YPR125W	NDC80	P40460	691 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	YAR1	P46683	200 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	TRS85	P46944	698 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	HSH155	P49955	971 aa	Known RBP	5.06	□□□□□ -1.6
YLH47	YPR125W	YGR168C	P53293	376 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	RLI1	Q03195	608 aa	Known RBP	5.06	□□□□□ -1.6
YLH47	YPR125W	YDR387C	Q04162	555 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	RAX1	Q08760	435 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	KOG1	P38873	1557 aa		5.06	□□□□□ -1.6
YLH47	YPR125W	PDR15	Q04182	1529 aa	Known RBP	5.05	□□□□□ -1.6
YLH47	YPR125W	CLN3	P13365	580 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	CKI1	P20485	582 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	APA2	P22108	325 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YSR3	P23501	404 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	APE2	P32454	952 aa	Known RBP	5.05	□□□□□ -1.6
YLH47	YPR125W	TMT1	P32643	299 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	COS9	P36034	407 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YKL162C	P36052	402 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	TDA10	P42938	290 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	HAM1	P47119	197 aa	Known RBP	5.05	□□□□□ -1.6
YLH47	YPR125W	YJR154W	P47181	346 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	KAP114	P53067	1004 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	SMX3	P54999	86 aa	Predicted RBP	5.05	□□□□□ -1.6
YLH47	YPR125W	IZH1	Q03419	316 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YLR283W	Q05867	314 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YOL075C	Q08234	1294 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YOR389W	Q08912	624 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YLL056C	Q12177	298 aa		5.05	□□□□□ -1.6
YLH47	YPR125W	YCF1	P39109	1515 aa	Known RBP	5.05	□□□□□ -1.6
YLH47	YPR125W	RAD7	P06779	565 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	BAR1	P12630	587 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	COQ1	P18900	473 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	AIM29	P36154	155 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	FLO10	P36170	1169 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	CBR1	P38626	284 aa	Known RBP	5.04	□□□□□ -1.6
YLH47	YPR125W	TSC11	P40061	1430 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	YMR134W	P40207	237 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	BTT1	P40314	149 aa	Predicted RBP	5.04	□□□□□ -1.6
YLH47	YPR125W	UTP18	P40362	594 aa	Predicted RBP	5.04	□□□□□ -1.6
YLH47	YPR125W	LYS12	P40495	371 aa	Known RBP	5.04	□□□□□ -1.6
YLH47	YPR125W	YIL060W	P40519	144 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	HIT1	P46973	164 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	CPR8	P53728	308 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	MPS1	P54199	764 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	FMP30	Q02883	468 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	CMS1	Q07897	291 aa	Known RBP	5.04	□□□□□ -1.6
YLH47	YPR125W	PAM18	Q07914	168 aa		5.04	□□□□□ -1.6
YLH47	YPR125W	CMC2	Q3E7A4	109 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms