RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W BAT2P47176 376 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W GEP7P53171 287 aa2.11□□□□□ -2.07
SEC16YPL085W YNL181WP53878 407 aa2.11□□□□□ -2.07
SEC16YPL085W RHO5P53879 331 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W RSC9Q03124 581 aa2.11□□□□□ -2.07
SEC16YPL085W YDR124WQ04608 324 aa2.11□□□□□ -2.07
SEC16YPL085W AGC1Q12482 902 aa2.11□□□□□ -2.07
SEC16YPL085W HTA2P04912 132 aa2.11□□□□□ -2.07
SEC16YPL085W SSC1P0CS90 654 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W DBF2P22204 572 aa2.11□□□□□ -2.07
SEC16YPL085W RPS1BP23248 255 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W PRO3P32263 286 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W SLX5P32828 619 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W RMA1P36001 430 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W SOL2P37262 315 aa2.11□□□□□ -2.07
SEC16YPL085W GLY1P37303 387 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W SRO77P38163 1010 aa2.11□□□□□ -2.07
SEC16YPL085W AVT2P39981 480 aa2.11□□□□□ -2.07
SEC16YPL085W SET4P42948 560 aa2.11□□□□□ -2.07
SEC16YPL085W SPT20P50875 604 aa2.11□□□□□ -2.07
SEC16YPL085W RBG2P53295 368 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W NRK1P53915 240 aa2.11□□□□□ -2.07
SEC16YPL085W OSH6Q02201 448 aa2.11□□□□□ -2.07
SEC16YPL085W YMR209CQ03648 457 aa2.11□□□□□ -2.07
SEC16YPL085W SNT309Q06091 175 aaPredicted RBP2.11□□□□□ -2.07
SEC16YPL085W DIS3Q08162 1001 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W GSH2Q08220 491 aa2.11□□□□□ -2.07
SEC16YPL085W YLR358CO13565 187 aa2.11□□□□□ -2.07
SEC16YPL085W YPT1P01123 206 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W MAK32P23060 363 aa2.11□□□□□ -2.07
SEC16YPL085W HSP30P25619 332 aa2.11□□□□□ -2.07
SEC16YPL085W POP5P28005 173 aa2.11□□□□□ -2.07
SEC16YPL085W CDC5P32562 705 aa2.11□□□□□ -2.07
SEC16YPL085W NRP1P32770 719 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SEC16YPL085W RRN6P32786 894 aa2.11□□□□□ -2.07
SEC16YPL085W PTM1P32857 523 aa2.11□□□□□ -2.07
SEC16YPL085W ECM15P35195 104 aa2.11□□□□□ -2.07
SEC16YPL085W HEL1P36113 551 aa2.11□□□□□ -2.07
SEC16YPL085W SHM1P37292 490 aaPredicted RBP2.11□□□□□ -2.07
SEC16YPL085W YBR225WP38321 900 aa2.11□□□□□ -2.07
SEC16YPL085W SET5P38890 526 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W SYS1P41544 203 aa2.11□□□□□ -2.07
SEC16YPL085W PFA3P42836 336 aa2.11□□□□□ -2.07
SEC16YPL085W ZIP2P53061 704 aa2.11□□□□□ -2.07
SEC16YPL085W YDR444WQ04093 687 aa2.11□□□□□ -2.07
SEC16YPL085W SPO77Q06134 477 aa2.11□□□□□ -2.07
SEC16YPL085W PDR8Q06149 701 aa2.11□□□□□ -2.07
SEC16YPL085W SSK1Q07084 712 aa2.11□□□□□ -2.07
SEC16YPL085W YOL131WQ08270 108 aa2.11□□□□□ -2.07
SEC16YPL085W TPO4Q12256 659 aa2.11□□□□□ -2.07
SEC16YPL085W CDC28P00546 298 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W NOP1P15646 327 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W PDC5P16467 563 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W RPA135P22138 1203 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W AGP1P25376 633 aa2.11□□□□□ -2.07
SEC16YPL085W PMT2P31382 759 aa2.11□□□□□ -2.07
SEC16YPL085W GDH2P33327 1092 aaKnown RBP2.11□□□□□ -2.07
SEC16YPL085W RPC25P35718 212 aa2.11□□□□□ -2.07
SEC16YPL085W SKN7P38889 622 aa2.11□□□□□ -2.07
SEC16YPL085W YEL020CP39994 560 aa2.11□□□□□ -2.07
SEC16YPL085W DLS1P40366 167 aa2.11□□□□□ -2.07
SEC16YPL085W HIS6P40545 261 aa2.11□□□□□ -2.07
SEC16YPL085W OCA1P50946 238 aaPredicted RBP2.11□□□□□ -2.07
SEC16YPL085W ARG5,6Q01217 863 aa2.11□□□□□ -2.07
SEC16YPL085W MUK1Q02866 612 aa2.11□□□□□ -2.07
SEC16YPL085W FIN1Q03898 291 aa2.11□□□□□ -2.07
SEC16YPL085W FRE3Q08905 711 aa2.11□□□□□ -2.07
SEC16YPL085W YDR157WA0A023PZE8 133 aa2.1□□□□□ -2.07
SEC16YPL085W GEX1P25596 615 aa2.1□□□□□ -2.07
SEC16YPL085W THI80P35202 319 aa2.1□□□□□ -2.07
SEC16YPL085W YKL071WP36086 256 aa2.1□□□□□ -2.07
SEC16YPL085W ANR2P36090 516 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W ALY1P36117 915 aa2.1□□□□□ -2.07
SEC16YPL085W OMA1P36163 345 aa2.1□□□□□ -2.07
SEC16YPL085W GEX2P36173 615 aa2.1□□□□□ -2.07
SEC16YPL085W GDT1P38301 280 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W TRS20P38334 175 aa2.1□□□□□ -2.07
SEC16YPL085W YBR292CP38357 123 aa2.1□□□□□ -2.07
SEC16YPL085W YAR028WP39548 234 aa2.1□□□□□ -2.07
SEC16YPL085W FAU1P40099 211 aa2.1□□□□□ -2.07
SEC16YPL085W MRPS18P42847 217 aa2.1□□□□□ -2.07
SEC16YPL085W YNR062CP53748 327 aa2.1□□□□□ -2.07
SEC16YPL085W GAS3Q03655 524 aa2.1□□□□□ -2.07
SEC16YPL085W THI74Q04083 370 aa2.1□□□□□ -2.07
SEC16YPL085W YLR281CQ05863 155 aa2.1□□□□□ -2.07
SEC16YPL085W CRN1Q06440 651 aa2.1□□□□□ -2.07
SEC16YPL085W YOR385WQ08909 290 aa2.1□□□□□ -2.07
SEC16YPL085W RAD28Q12021 506 aa2.1□□□□□ -2.07
SEC16YPL085W YOR022CQ12204 715 aa2.1□□□□□ -2.07
SEC16YPL085W SUT2Q12286 268 aa2.1□□□□□ -2.07
SEC16YPL085W SUA7P29055 345 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W SUI1P32911 108 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W SKG1P36169 355 aa2.1□□□□□ -2.07
SEC16YPL085W DUG2P38149 878 aa2.1□□□□□ -2.07
SEC16YPL085W YPT35P38815 214 aaKnown RBP2.1□□□□□ -2.07
SEC16YPL085W HPM1P40481 377 aa2.1□□□□□ -2.07
SEC16YPL085W GSM1P42950 618 aa2.1□□□□□ -2.07
SEC16YPL085W SWP82P43554 623 aa2.1□□□□□ -2.07
SEC16YPL085W BPL1P48445 690 aaPredicted RBP2.1□□□□□ -2.07
SEC16YPL085W HSV2P50079 448 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms