RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	YFR016C	P43597	1233 aa	Known RBP	3.39	□□□□□ -1.87
CAF20	YOR276W	SFH5	P47008	294 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	YGR117C	P53270	476 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	BCH1	Q05029	724 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	HCR1	Q05775	265 aa	Known RBP	3.39	□□□□□ -1.87
CAF20	YOR276W	CUR1	Q06469	252 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	SRL1	Q08673	210 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	DAP1	Q12091	152 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	TPT1	Q12272	230 aa	Known RBP	3.39	□□□□□ -1.87
CAF20	YOR276W	YOP1	Q12402	180 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	POM152	P39685	1337 aa		3.39	□□□□□ -1.87
CAF20	YOR276W	YLL053C	P0CD98	152 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	RPS16A	P0CX51	143 aa	Known RBP	3.38	□□□□□ -1.87
CAF20	YOR276W	RPS16B	P0CX52	143 aa	Known RBP	3.38	□□□□□ -1.87
CAF20	YOR276W	ATR1	P13090	542 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	CAP2	P13517	287 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	CDC23	P16522	626 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	OM45	P16547	393 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	EXG1	P23776	448 aa	Known RBP	3.38	□□□□□ -1.87
CAF20	YOR276W	PET18	P25362	215 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	NAT2	P37293	288 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	CHK1	P38147	527 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	YBR137W	P38276	179 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	YHR122W	P38829	231 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	RPH1	P39956	796 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	RRN9	P53437	365 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	WSC2	P53832	503 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
CAF20	YOR276W	YMR181C	Q03231	154 aa		3.38	□□□□□ -1.87
CAF20	YOR276W	MRPL23	Q12487	163 aa	Predicted RBP	3.38	□□□□□ -1.87
CAF20	YOR276W	RRP12	Q12754	1228 aa	Known RBP	3.38	□□□□□ -1.87
CAF20	YOR276W	SSC1	P0CS90	654 aa	Known RBP	3.37	□□□□□ -1.87
CAF20	YOR276W	CPR1	P14832	162 aa	Known RBP	3.37	□□□□□ -1.87
CAF20	YOR276W	CKI1	P20485	582 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	RNA14	P25298	677 aa	Known RBP	3.37	□□□□□ -1.87
CAF20	YOR276W	TOA2	P32774	122 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	SWC5	P38326	303 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	LCP5	P40079	357 aa	Predicted RBP	3.37	□□□□□ -1.87
CAF20	YOR276W	HXT11	P54862	567 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	CAB5	Q03941	241 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	ERP1	Q05359	219 aa	Known RBP	3.37	□□□□□ -1.87
CAF20	YOR276W	MRPL35	Q06678	367 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	YLR413W	Q06689	675 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	THP3	Q12049	470 aa	Known RBP	3.37	□□□□□ -1.87
CAF20	YOR276W	CEX1	Q12453	761 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	YOR338W	Q99326	363 aa		3.37	□□□□□ -1.87
CAF20	YOR276W	YEF1	P32622	495 aa		3.36	□□□□□ -1.87
CAF20	YOR276W	MIX23	P38162	196 aa		3.36	□□□□□ -1.87
CAF20	YOR276W	RTC2	P38279	296 aa		3.36	□□□□□ -1.87
CAF20	YOR276W	MTC6	P38849	526 aa		3.36	□□□□□ -1.87
CAF20	YOR276W	PNC1	P53184	216 aa	Known RBP	3.36	□□□□□ -1.87
CAF20	YOR276W	YMR111C	Q04461	462 aa	Predicted RBP	3.36	□□□□□ -1.87
CAF20	YOR276W	RAX1	Q08760	435 aa		3.36	□□□□□ -1.87
CAF20	YOR276W	AHC1	Q12433	566 aa		3.36	□□□□□ -1.87
CAF20	YOR276W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	RIP-Chip
CAF20	YOR276W	MAS2	P11914	482 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	MCK1	P21965	375 aa	Known RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	CIN8	P27895	1000 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	YPS1	P32329	569 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	EFB1	P32471	206 aa	Known RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	ZUO1	P32527	433 aa	Known RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	MUD1	P32605	298 aa	Known RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	MRP4	P32902	394 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	MCR1	P36060	302 aa	Known RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	GPX2	P38143	162 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	GEP4	P38812	185 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	JLP2	P40206	208 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	SEC9	P40357	651 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	NCA3	P46955	337 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	ABM1	P47146	123 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	RIB4	P50861	169 aa	Predicted RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	IBD2	P53892	351 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	EGD1	Q02642	157 aa	Known RBP	3.35	□□□□□ -1.87
CAF20	YOR276W	APC5	Q08683	685 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	YDR262W	Q12331	272 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	YIL002W-A	Q3E7Z5	69 aa		3.35	□□□□□ -1.87
CAF20	YOR276W	SPS22	P25380	463 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	MXR2	P25566	168 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	MNS1	P32906	549 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	YBP1	P38315	674 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	VPS45	P38932	577 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	CCT4	P39078	528 aa	Known RBP	3.34	□□□□□ -1.87
CAF20	YOR276W	AIP1	P46680	615 aa	Known RBP	3.34	□□□□□ -1.87
CAF20	YOR276W	YDL186W	P48568	277 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	DBP6	P53734	629 aa	Known RBP	3.34	□□□□□ -1.87
CAF20	YOR276W	COS1	P53822	381 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	NAT4	Q04751	285 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	BUR2	Q05949	395 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	SHS1	Q07657	551 aa		3.34	□□□□□ -1.87
CAF20	YOR276W	RPL18A	P0CX49	186 aa	Known RBP	3.33	□□□□□ -1.88
CAF20	YOR276W	RPL18B	P0CX50	186 aa	Known RBP	3.33	□□□□□ -1.88
CAF20	YOR276W	MRPL8	P22353	238 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	AGA1	P32323	725 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	VAM7	P32912	316 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	BUD2	P33314	1104 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	not detected
CAF20	YOR276W	TIR2	P33890	251 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	YJL213W	P40896	331 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	YFL067W	P43537	175 aa		3.33	□□□□□ -1.88
CAF20	YOR276W	WWM1	P43582	211 aa	Known RBP	3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms